RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 PDE6AP16499 860 aa25.03■■□□□ 1.6
LMBR1-203ENST00000414218 PABPC4Q13310 644 aaKnown RBP eCLIP25.03■■□□□ 1.6
LMBR1-203ENST00000414218 MTMR2Q13614 643 aa25.03■■□□□ 1.6
LMBR1-203ENST00000414218 SLC9C2Q5TAH2 1124 aa25.03■■□□□ 1.6
LMBR1-203ENST00000414218 ZBTB21Q9ULJ3 1066 aa25.03■■□□□ 1.6
LMBR1-203ENST00000414218 MAGEB6P1A0A0J9YX57 407 aa25.02■■□□□ 1.6
LMBR1-203ENST00000414218 BACE1P56817 501 aa25.02■■□□□ 1.6
LMBR1-203ENST00000414218 MTFR1Q15390 333 aa25.02■■□□□ 1.6
LMBR1-203ENST00000414218 EDC3Q96F86 508 aaKnown RBP25.02■■□□□ 1.6
LMBR1-203ENST00000414218 RIOK1Q9BRS2 568 aaKnown RBP25.02■■□□□ 1.6
LMBR1-203ENST00000414218 ASCC2Q9H1I8 757 aaPredicted RBP25.02■■□□□ 1.6
LMBR1-203ENST00000414218 GINM1Q9NU53 330 aa25.02■■□□□ 1.6
LMBR1-203ENST00000414218 TMOD4Q9NZQ9 345 aa25.01■■□□□ 1.59
LMBR1-203ENST00000414218 BIN2Q9UBW5 565 aaPredicted RBP25.01■■□□□ 1.59
LMBR1-203ENST00000414218 TNPO2O14787 897 aaKnown RBP25■■□□□ 1.59
LMBR1-203ENST00000414218 TTC6Q86TZ1 520 aa25■■□□□ 1.59
LMBR1-203ENST00000414218 BOLA2Q9H3K6 86 aa25■■□□□ 1.59
LMBR1-203ENST00000414218 SERPINB13Q9UIV8 391 aa25■■□□□ 1.59
LMBR1-203ENST00000414218 ZNF532Q9HCE3 1301 aa25■■□□□ 1.59
LMBR1-203ENST00000414218 C19orf81C9J6K1 198 aa24.99■■□□□ 1.59
LMBR1-203ENST00000414218 USP17L10C9JJH3 530 aa24.99■■□□□ 1.59
LMBR1-203ENST00000414218 GH2P01242 217 aa24.99■■□□□ 1.59
LMBR1-203ENST00000414218 GCLCP48506 637 aaPredicted RBP24.99■■□□□ 1.59
LMBR1-203ENST00000414218 FLT3LGP49771 235 aa24.99■■□□□ 1.59
LMBR1-203ENST00000414218 FAM110CQ1W6H9 321 aa24.99■■□□□ 1.59
LMBR1-203ENST00000414218 TATDN1Q6P1N9 297 aa24.99■■□□□ 1.59
LMBR1-203ENST00000414218 EHD4Q9H223 541 aa24.99■■□□□ 1.59
LMBR1-203ENST00000414218 BRCA2P51587 3418 aa24.98■■□□□ 1.59
LMBR1-203ENST00000414218 TCRBV5S4A2TA0A5A2 114 aa24.98■■□□□ 1.59
LMBR1-203ENST00000414218 ATP5JP18859 108 aa24.98■■□□□ 1.59
LMBR1-203ENST00000414218 PLCD1P51178 756 aa24.98■■□□□ 1.59
LMBR1-203ENST00000414218 SLAIN1Q8ND83 568 aa24.98■■□□□ 1.59
LMBR1-203ENST00000414218 CRNKL1Q9BZJ0 848 aaKnown RBP24.98■■□□□ 1.59
LMBR1-203ENST00000414218 PAG1Q9NWQ8 432 aa24.98■■□□□ 1.59
LMBR1-203ENST00000414218 DOCK3Q8IZD9 2030 aa24.98■■□□□ 1.59
LMBR1-203ENST00000414218 MKI67P46013 3256 aaKnown RBP24.97■■□□□ 1.59
LMBR1-203ENST00000414218 SMARCA5O60264 1052 aaPredicted RBP24.97■■□□□ 1.59
LMBR1-203ENST00000414218 ADCY3O60266 1144 aa24.97■■□□□ 1.59
LMBR1-203ENST00000414218 POLR3DP05423 398 aaPredicted RBP24.97■■□□□ 1.59
LMBR1-203ENST00000414218 CCL5P13501 91 aa24.97■■□□□ 1.59
LMBR1-203ENST00000414218 IRX3P78415 501 aaPredicted RBP24.97■■□□□ 1.59
LMBR1-203ENST00000414218 COA7Q96BR5 231 aa24.97■■□□□ 1.59
LMBR1-203ENST00000414218 LRRCC1Q9C099 1032 aa24.97■■□□□ 1.59
LMBR1-203ENST00000414218 HOXA7P31268 230 aaPredicted RBP24.96■■□□□ 1.59
LMBR1-203ENST00000414218 UBXN2AP68543 259 aa24.96■■□□□ 1.59
LMBR1-203ENST00000414218 CERKLQ49MI3 558 aaPredicted RBP24.96■■□□□ 1.59
LMBR1-203ENST00000414218 P2RX7Q99572 595 aaKnown RBP24.96■■□□□ 1.59
LMBR1-203ENST00000414218 NAV1Q8NEY1 1877 aa24.96■■□□□ 1.59
LMBR1-203ENST00000414218 ELNP15502 786 aa24.95■■□□□ 1.58
LMBR1-203ENST00000414218 SLFNL1Q499Z3 407 aa24.95■■□□□ 1.58
LMBR1-203ENST00000414218 LCORLQ8N3X6 602 aa24.95■■□□□ 1.58
LMBR1-203ENST00000414218 HAUS7Q99871 368 aa24.95■■□□□ 1.58
LMBR1-203ENST00000414218 EMILIN3Q9NT22 766 aa24.95■■□□□ 1.58
LMBR1-203ENST00000414218 TAOK2Q9UL54 1235 aa24.95■■□□□ 1.58
LMBR1-203ENST00000414218 DDX60LQ5H9U9 1706 aaKnown RBP24.95■■□□□ 1.58
LMBR1-203ENST00000414218 IRF5Q13568 498 aa24.94■■□□□ 1.58
LMBR1-203ENST00000414218 USP17L2Q6R6M4 530 aa24.94■■□□□ 1.58
LMBR1-203ENST00000414218 SDR42E1Q8WUS8 393 aa24.94■■□□□ 1.58
LMBR1-203ENST00000414218 RNF208Q9H0X6 261 aa24.94■■□□□ 1.58
LMBR1-203ENST00000414218 MCM9Q9NXL9 1143 aa24.94■■□□□ 1.58
LMBR1-203ENST00000414218 SHMT1P34896 483 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 ADD2P35612 726 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 EVX2Q03828 476 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 RAB3GAP1Q15042 981 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 ABCB5Q2M3G0 1257 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 SHISA4Q96DD7 197 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 ARMT1Q9H993 441 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 MORF4L1Q9UBU8 362 aa24.93■■□□□ 1.58
LMBR1-203ENST00000414218 PEX10O60683 326 aa24.92■■□□□ 1.58
LMBR1-203ENST00000414218 GJB1P08034 283 aa24.92■■□□□ 1.58
LMBR1-203ENST00000414218 HERVK_113P62684 666 aa24.92■■□□□ 1.58
LMBR1-203ENST00000414218 ZYXQ15942 572 aaKnown RBP24.92■■□□□ 1.58
LMBR1-203ENST00000414218 PXYLP1Q8TE99 480 aa24.92■■□□□ 1.58
LMBR1-203ENST00000414218 FEZ1Q99689 392 aa24.92■■□□□ 1.58
LMBR1-203ENST00000414218 UNC93B1Q9H1C4 597 aa24.92■■□□□ 1.58
LMBR1-203ENST00000414218 DCP1AQ9NPI6 582 aaPredicted RBP24.92■■□□□ 1.58
LMBR1-203ENST00000414218 SLC34A2O95436 690 aa24.91■■□□□ 1.58
LMBR1-203ENST00000414218 INHAP05111 366 aa24.91■■□□□ 1.58
LMBR1-203ENST00000414218 GABPAQ06546 454 aa24.91■■□□□ 1.58
LMBR1-203ENST00000414218 NKX2-3Q8TAU0 364 aa24.91■■□□□ 1.58
LMBR1-203ENST00000414218 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.91■■□□□ 1.582e-6■■■□□ 16.1
LMBR1-203ENST00000414218 CABP5Q9NP86 173 aa24.91■■□□□ 1.58
LMBR1-203ENST00000414218 MBD4O95243 580 aa24.9■■□□□ 1.58
LMBR1-203ENST00000414218 CHGBP05060 677 aa24.9■■□□□ 1.58
LMBR1-203ENST00000414218 CYP2D6P10635 497 aa24.9■■□□□ 1.58
LMBR1-203ENST00000414218 GJA8P48165 433 aa24.9■■□□□ 1.58
LMBR1-203ENST00000414218 ACER1Q8TDN7 264 aa24.9■■□□□ 1.58
LMBR1-203ENST00000414218 TXNRD2Q9NNW7 524 aa24.9■■□□□ 1.58
LMBR1-203ENST00000414218 PRKAB2O43741 272 aa24.89■■□□□ 1.58
LMBR1-203ENST00000414218 GPRC5AQ8NFJ5 357 aa24.89■■□□□ 1.58
LMBR1-203ENST00000414218 DCTPP1Q9H773 170 aa24.89■■□□□ 1.58
LMBR1-203ENST00000414218 RBPJLQ9UBG7 517 aa24.89■■□□□ 1.58
LMBR1-203ENST00000414218 GJD2Q9UKL4 321 aa24.89■■□□□ 1.58
LMBR1-203ENST00000414218 MYH7P12883 1935 aa24.88■■□□□ 1.57
LMBR1-203ENST00000414218 GUCY1A2P33402 732 aa24.88■■□□□ 1.57
LMBR1-203ENST00000414218 C12orf42Q96LP6 360 aa24.88■■□□□ 1.57
LMBR1-203ENST00000414218 KIAA1683Q9H0B3 1180 aa24.88■■□□□ 1.57
LMBR1-203ENST00000414218 SEPT2Q15019 361 aa24.87■■□□□ 1.57
LMBR1-203ENST00000414218 U2AF1L4Q8WU68 220 aaKnown RBP24.87■■□□□ 1.57
LMBR1-203ENST00000414218 PAGR1Q9BTK6 254 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms