RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 LRRC2Q9BYS8 371 aa16.69■□□□□ 0.26
CHRNA1-204ENST00000409323 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
CHRNA1-204ENST00000409323 TBC1D12O60347 775 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 TFAP4Q01664 338 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 ZNF444Q8N0Y2 327 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 KCNB2Q92953 911 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 KLRG1Q96E93 195 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 CLMNQ96JQ2 1002 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 SWAP70Q9UH65 585 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 PASKQ96RG2 1323 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 TSPY2A6NKD2 308 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 GH2P01242 217 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 CASTP20810 708 aaKnown RBP16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 TRDNQ13061 729 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 NCOA7Q8NI08 942 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 GBA2Q9HCG7 927 aaPredicted RBP16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 ZSWIM5Q9P217 1185 aa16.68■□□□□ 0.26
CHRNA1-204ENST00000409323 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 EIF5BO60841 1220 aaKnown RBP16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 MAP3K10Q02779 954 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 RAB3GAP1Q15042 981 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 ABCB5Q2M3G0 1257 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 CHMP4CQ96CF2 233 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 HOOK2Q96ED9 719 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 GPHNQ9NQX3 736 aaPredicted RBP16.67■□□□□ 0.26
CHRNA1-204ENST00000409323 DOCK1Q14185 1865 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 ORC4O43929 436 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 FGRP09769 529 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 CAP2P40123 477 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 ANTXR2P58335 489 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 VGLL4Q14135 290 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 SEPT2Q15019 361 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 MB21D2Q8IYB1 491 aaPredicted RBP16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 KIF2CQ99661 725 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 KRT23Q9C075 422 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 RBM19Q9Y4C8 960 aaKnown RBP16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
CHRNA1-204ENST00000409323 GUCY1A2P33402 732 aa16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 IREB2P48200 963 aaKnown RBP16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 ARMC9Q7Z3E5 817 aa16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 ESR2Q92731 530 aa16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 ELP3Q9H9T3 547 aa16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
CHRNA1-204ENST00000409323 MAP3K9P80192 1104 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 C2orf69Q8N8R5 385 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 CNNM2Q9H8M5 875 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 IL17RBQ9NRM6 502 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 ZNF112Q9UJU3 913 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 PRC1O43663 620 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 KRT32Q14532 448 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 SCYL3Q8IZE3 742 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 CEP95Q96GE4 821 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 CABP5Q9NP86 173 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 MTMR7Q9Y216 660 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 SNCAIPQ9Y6H5 919 aa16.64■□□□□ 0.25
CHRNA1-204ENST00000409323 GREB1LQ9C091 1923 aaPredicted RBP16.63■□□□□ 0.25
CHRNA1-204ENST00000409323 CTNND1O60716 968 aaKnown RBP16.63■□□□□ 0.25
CHRNA1-204ENST00000409323 FSTL1Q12841 308 aa16.63■□□□□ 0.25
CHRNA1-204ENST00000409323 NOL8Q76FK4 1167 aaKnown RBP16.63■□□□□ 0.25
CHRNA1-204ENST00000409323 CSADQ9Y600 493 aa16.63■□□□□ 0.25
CHRNA1-204ENST00000409323 MYH4Q9Y623 1939 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 HUNKP57058 714 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 ANAPC15P60006 121 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 HTRA3P83110 453 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 DGKZQ13574 1117 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 ZYXQ15942 572 aaKnown RBP16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 NEDD1Q8NHV4 660 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 CCDC17Q96LX7 622 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 UBAC1Q9BSL1 405 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 TNKSO95271 1327 aa16.62■□□□□ 0.25
CHRNA1-204ENST00000409323 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 PTPRAP18433 802 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 RPS6KB1P23443 525 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 PSMA5P28066 241 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 MCM5P33992 734 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 ECE1P42892 770 aa16.61■□□□□ 0.25
CHRNA1-204ENST00000409323 ICA1Q05084 483 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms