RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CLUAP1Q96AJ1 413 aa11.29□□□□□ -0.6
NIF3L1-203ENST00000409129 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.29□□□□□ -0.6
NIF3L1-203ENST00000409129 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
NIF3L1-203ENST00000409129 LTBP2Q14767 1821 aa11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 DOCK2Q92608 1830 aa11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 TRIM75PA6NK02 468 aa11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 UQCRFS1P1P0C7P4 283 aa11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 PAK6Q9NQU5 681 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 LRP2BPQ9P2M1 347 aa11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 MAST2Q6P0Q8 1798 aa11.28□□□□□ -0.6
NIF3L1-203ENST00000409129 COL2A1P02458 1487 aaPredicted RBP11.27□□□□□ -0.6
NIF3L1-203ENST00000409129 FAM196BA6NMK8 535 aa11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 MCAMP43121 646 aa11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 FLT3LGP49771 235 aa11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 NECAB2Q7Z6G3 386 aa11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 SMCR8Q8TEV9 937 aaPredicted RBP11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 GPR108Q9NPR9 543 aa11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 AGTPBP1Q9UPW5 1226 aa11.27□□□□□ -0.61
NIF3L1-203ENST00000409129 CAP2P40123 477 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 SPP2Q13103 211 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 ZKSCAN2Q63HK3 967 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 TEX11Q8IYF3 940 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 TMEM57Q8N5G2 664 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 ZNF280CQ8ND82 737 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 NOL10Q9BSC4 688 aaKnown RBP11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 TBC1D2Q9BYX2 928 aa11.26□□□□□ -0.61
NIF3L1-203ENST00000409129 USP17L5A8MUK1 530 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 POTEB2H3BUK9 544 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 TNPO2O14787 897 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 BAG3O95817 575 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 ATP8B2P98198 1209 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 IRF5Q13568 498 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 RRP1BQ14684 758 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 TNNI3KQ59H18 835 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 CCDC158Q5M9N0 1113 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 TTC39AQ5SRH9 613 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 NAA16Q6N069 864 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 ANKRD13CQ8N6S4 541 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 SSH3Q8TE77 659 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 DHX36Q9H2U1 1008 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 FPGT-TNNI3KV9GXZ4 949 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 DOCK1Q14185 1865 aa11.25□□□□□ -0.61
NIF3L1-203ENST00000409129 PLCG2P16885 1265 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 CAPN2P17655 700 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 CLCN6P51797 869 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 HMGCS2P54868 508 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 PPP4CP60510 307 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 TRIM32Q13049 653 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 PABPC4Q13310 644 aaKnown RBP eCLIP11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 OS9Q13438 667 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 FAM110CQ1W6H9 321 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 COA7Q96BR5 231 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 AATFQ9NY61 560 aaKnown RBP eCLIP11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 MYO9BQ13459 2157 aa11.24□□□□□ -0.61
NIF3L1-203ENST00000409129 IGSF3O75054 1194 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 CYP2E1P05181 493 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 GCLCP48506 637 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 SH3D19Q5HYK7 790 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 FOXP4Q8IVH2 680 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 MAFAQ8NHW3 353 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 TGFBRAP1Q8WUH2 860 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 ZNF512BQ96KM6 892 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 WDR18Q9BV38 432 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 AS3MTQ9HBK9 375 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 PFASO15067 1338 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 ATAD5Q96QE3 1844 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 NCOR1O75376 2440 aa11.23□□□□□ -0.61
NIF3L1-203ENST00000409129 PYGBP11216 843 aa11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 ZAP70P43403 619 aa11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 ADGRA1Q86SQ6 560 aa11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 METTL16Q86W50 562 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 MAPKAPK5Q8IW41 473 aa11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 ASCC2Q9H1I8 757 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 TCF20Q9UGU0 1960 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 NOP58Q9Y2X3 529 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-203ENST00000409129 FLT1P17948 1338 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 ASNSP08243 561 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 BACE1P56817 501 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 JAG1P78504 1218 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms