RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 CCDC152Q4G0S7 254 aa15.63■□□□□ 0.09
PMS2-204ENST00000406569 SEC31BQ9NQW1 1179 aa15.63■□□□□ 0.09
PMS2-204ENST00000406569 AATFQ9NY61 560 aaKnown RBP eCLIP15.63■□□□□ 0.09
PMS2-204ENST00000406569 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
PMS2-204ENST00000406569 GOLGA6L9A6NEM1 432 aa15.62■□□□□ 0.09
PMS2-204ENST00000406569 POLR2DO15514 142 aaKnown RBP15.62■□□□□ 0.09
PMS2-204ENST00000406569 FMR1Q06787 632 aaKnown RBP eCLIP15.62■□□□□ 0.09
PMS2-204ENST00000406569 FUT2Q10981 343 aa15.62■□□□□ 0.09
PMS2-204ENST00000406569 SH3RF1Q7Z6J0 888 aa15.62■□□□□ 0.09
PMS2-204ENST00000406569 KRT222Q8N1A0 295 aa15.62■□□□□ 0.09
PMS2-204ENST00000406569 SMARCE1Q969G3 411 aa15.62■□□□□ 0.09
PMS2-204ENST00000406569 MED15Q96RN5 788 aa15.62■□□□□ 0.09
PMS2-204ENST00000406569 SNAP23O00161 211 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 STX10O60499 249 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 CAMTA2O94983 1202 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 NTSR2O95665 410 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 FGRP09769 529 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 PRR29P0C7W0 189 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 BCAMP50895 628 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 PLCD1P51178 756 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 CCDC87Q9NVE4 849 aa15.61■□□□□ 0.09
PMS2-204ENST00000406569 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.61■□□□□ 0.09
PMS2-204ENST00000406569 V9GYY5 206 aaPredicted RBP15.61■□□□□ 0.09
PMS2-204ENST00000406569 BAZ2AQ9UIF9 1905 aaKnown RBP15.61■□□□□ 0.09
PMS2-204ENST00000406569 EXOC5O00471 708 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 FANCGO15287 622 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 BMP15O95972 392 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 IGHMBP2P38935 993 aaKnown RBP15.6■□□□□ 0.09
PMS2-204ENST00000406569 NR5A1Q13285 461 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 PKN1Q16512 942 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 SPECC1LQ69YQ0 1117 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 HOMER1Q86YM7 354 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 NUTM2AQ8IVF1 878 aaPredicted RBP15.6■□□□□ 0.09
PMS2-204ENST00000406569 TC2NQ8N9U0 490 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 SHISA4Q96DD7 197 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 ZNF446Q9NWS9 450 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 DNAI1Q9UI46 699 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 PPP2R2CQ9Y2T4 447 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 NFE2L3Q9Y4A8 694 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 COL4A1P02462 1669 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 ZNF831Q5JPB2 1677 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 ROBO1Q9Y6N7 1651 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 VWA3AA6NCI4 1184 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 PRPF3O43395 683 aaKnown RBP15.6■□□□□ 0.09
PMS2-204ENST00000406569 PCP11498 1178 aaKnown RBP15.6■□□□□ 0.09
PMS2-204ENST00000406569 FAM193AP78312 1265 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 ERCC6LQ2NKX8 1250 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 RRP12Q5JTH9 1297 aaKnown RBP15.6■□□□□ 0.09
PMS2-204ENST00000406569 SPECC1Q5M775 1068 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 LRRN4CLQ8ND94 238 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 OXER1Q8TDS5 423 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 ESR2Q92731 530 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 ZKSCAN3Q9BRR0 538 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 PHF20Q9BVI0 1012 aa15.6■□□□□ 0.09
PMS2-204ENST00000406569 LAMB1P07942 1786 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 ZNF335Q9H4Z2 1342 aaPredicted RBP15.59■□□□□ 0.09
PMS2-204ENST00000406569 A0A1B0GTH6 734 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 TRIM75PA6NK02 468 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 TADA3O75528 432 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 CYP7A1P22680 504 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 CHRNDQ07001 517 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 NR1I3Q14994 352 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 CDC5LQ99459 802 aaKnown RBP15.59■□□□□ 0.09
PMS2-204ENST00000406569 BAG1Q99933 345 aaPredicted RBP15.59■□□□□ 0.09
PMS2-204ENST00000406569 RIOK1Q9BRS2 568 aaKnown RBP15.59■□□□□ 0.09
PMS2-204ENST00000406569 UBAC1Q9BSL1 405 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 CSRNP2Q9H175 543 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 LRP2BPQ9P2M1 347 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 PARP3Q9Y6F1 533 aa15.59■□□□□ 0.09
PMS2-204ENST00000406569 TNKSO95271 1327 aa15.58■□□□□ 0.09
PMS2-204ENST00000406569 COL1A1P02452 1464 aaPredicted RBP15.58■□□□□ 0.09
PMS2-204ENST00000406569 COL5A3P25940 1745 aaPredicted RBP15.58■□□□□ 0.08
PMS2-204ENST00000406569 APTXQ7Z2E3 356 aaKnown RBP15.58■□□□□ 0.08
PMS2-204ENST00000406569 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
PMS2-204ENST00000406569 SEMA3EO15041 775 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 SLFN14P0C7P3 912 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 XBP1P17861 261 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 CRKLP46109 303 aaKnown RBP15.57■□□□□ 0.08
PMS2-204ENST00000406569 CUL4BQ13620 913 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 USP49Q70CQ1 688 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 ADGRA1Q86SQ6 560 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 ENAHQ8N8S7 591 aaPredicted RBP15.57■□□□□ 0.08
PMS2-204ENST00000406569 MIGA1Q8NAN2 632 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 TNFRSF25Q93038 417 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 FERMT2Q96AC1 680 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 CCDC34Q96HJ3 373 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 RBM28Q9NW13 759 aaKnown RBP15.57■□□□□ 0.08
PMS2-204ENST00000406569 RAI14Q9P0K7 980 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 MAGEB6P1A0A0J9YX57 407 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 EFCAB8A8MWE9 144 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 TPM1P09493 284 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 PBX1P40424 430 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 UBE4AQ14139 1066 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 BMS1Q14692 1282 aaKnown RBP15.57■□□□□ 0.08
PMS2-204ENST00000406569 SPATA1Q5VX52 437 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 TMED8Q6PL24 325 aaPredicted RBP15.57■□□□□ 0.08
PMS2-204ENST00000406569 CREBRFQ8IUR6 639 aa15.57■□□□□ 0.08
PMS2-204ENST00000406569 PANX2Q96RD6 677 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms