RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 PCDHB6Q9Y5E3 794 aa18.68■□□□□ 0.58
CDKN1A-203ENST00000405375 DLEC1Q9Y238 1755 aa18.68■□□□□ 0.58
CDKN1A-203ENST00000405375 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 USP17L21D6R901 530 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 GNPATO15228 680 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 PRDM1O75626 825 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 SKILP12757 684 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 GSDMDP57764 484 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 MDM2Q00987 491 aaPredicted RBP18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 IFIT1BQ5T764 474 aaKnown RBP18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 ISM2Q6H9L7 571 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 IQCA1Q86XH1 822 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 C16orf45Q96MC5 204 aaPredicted RBP18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 IFNKQ9P0W0 207 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 ZBTB22O15209 634 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 TM4SF1P30408 202 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 AMIGO3Q86WK7 504 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 CNNM3Q8NE01 707 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 MAP7D2Q96T17 732 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 TFCP2L1Q9NZI6 479 aa18.67■□□□□ 0.58
CDKN1A-203ENST00000405375 IRS2Q9Y4H2 1338 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 RIOK3O14730 519 aaKnown RBP18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 PRPF3O43395 683 aaKnown RBP18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 ZPR1O75312 459 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 TPM4P67936 248 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 SPECC1Q5M775 1068 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 CATIPQ7Z7H3 387 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 DCP1AQ9NPI6 582 aaPredicted RBP18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 PCDHA5Q9Y5H7 936 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 ORC4O43929 436 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 PRDX5P30044 214 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 EVX2Q03828 476 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 TSC1Q92574 1164 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 RBM28Q9NW13 759 aaKnown RBP18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 SRPRBQ9Y5M8 271 aaKnown RBP18.66■□□□□ 0.58
CDKN1A-203ENST00000405375 SMC2O95347 1197 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 PLEKHA8P1O95397 391 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 FNBP4Q8N3X1 1017 aaPredicted RBP18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 CCDC24Q8N4L8 307 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 DDAH1O94760 285 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 CALM1P0DP23 149 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 CALM2P0DP24 149 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 CALM3P0DP25 149 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 LMOD1P29536 600 aaPredicted RBP18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 AKAP17AQ02040 695 aaKnown RBP18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 MYL5Q02045 173 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 TMED8Q6PL24 325 aaPredicted RBP18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 TXNRD3Q86VQ6 643 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 CRNKL1Q9BZJ0 848 aaKnown RBP18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 CABP5Q9NP86 173 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 KCND1Q9NSA2 647 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 VPS54Q9P1Q0 977 aa18.65■□□□□ 0.58
CDKN1A-203ENST00000405375 MAST2Q6P0Q8 1798 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 NHSQ6T4R5 1651 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 FOXN1O15353 648 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 ATP1A3P13637 1013 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 TNNT1P13805 278 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 XBP1P17861 261 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 BMP6P22004 513 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 FAM182BQ5T319 152 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 MTERF4Q7Z6M4 381 aaKnown RBP18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 ARHGEF1Q92888 912 aaKnown RBP18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 ATP8A2Q9NTI2 1148 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 CEP131Q9UPN4 1083 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 RTCBQ9Y3I0 505 aaKnown RBP18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 LAMB1P07942 1786 aa18.64■□□□□ 0.57
CDKN1A-203ENST00000405375 USP27XA6NNY8 438 aa18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 FANCCQ00597 558 aa18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 TPD52L1Q16890 204 aaPredicted RBP18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 ZNF710Q8N1W2 664 aa18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 CCNL1Q9UK58 526 aaPredicted RBP18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 V9GY48 417 aaPredicted RBP18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 SBK1Q52WX2 424 aa18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 NT5DC1Q5TFE4 455 aa18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 TMTC3Q6ZXV5 915 aa18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
CDKN1A-203ENST00000405375 FAM205CA6NFA0 338 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 POLR2DO15514 142 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 CTIFO43310 598 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 NPY5RQ15761 445 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 EARS2Q5JPH6 523 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 ARMCX5Q6P1M9 558 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 NYAP1Q6ZVC0 841 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 ARPP21Q9UBL0 812 aaPredicted RBP18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 USP21Q9UK80 565 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 TNRC6CQ9HCJ0 1690 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 THSD7AQ9UPZ6 1657 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 CCDC88AQ3V6T2 1871 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 KRT2P35908 639 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 SARSP49591 514 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 POSTNQ15063 836 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 TMC6Q7Z403 805 aa18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 HOOK1Q9UJC3 728 aaKnown RBP18.62■□□□□ 0.57
CDKN1A-203ENST00000405375 NMT2O60551 498 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms