RNA–Protein interactions for RNA: ENST00000399621.5

CACNA1C-212, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-212ENST00000399621 TACC3Q9Y6A5 838 aa12.3□□□□□ -0.44
CACNA1C-212ENST00000399621 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
CACNA1C-212ENST00000399621 APOL6Q9BWW8 343 aa12.3□□□□□ -0.44
CACNA1C-212ENST00000399621 ZKSCAN5Q9Y2L8 839 aa12.3□□□□□ -0.44
CACNA1C-212ENST00000399621 ZRANB2O95218 330 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 STX17P56962 302 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 SDSP20132 328 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 ASXL1Q8IXJ9 1541 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 GIPC1O14908 333 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 HSPA1LP34931 641 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 MAP7Q14244 749 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 DDX17Q92841 729 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 PPP1R2P41236 205 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 ATP11AP98196 1134 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 PDE4DQ08499 809 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 ITKQ08881 620 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 MRRFQ96E11 262 aaKnown RBP12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 SPOPO43791 374 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 NOLC1Q14978 699 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 SRGAP1Q7Z6B7 1085 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
CACNA1C-212ENST00000399621 CAPN2P17655 700 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 CCNA1P78396 465 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 ARFGAP2Q8N6H7 521 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 ASIC2Q16515 512 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 RETREG2Q8NC44 543 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 LZTFL1Q9NQ48 299 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 NOS1P29475 1434 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 COL17A1Q9UMD9 1497 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 BRAPQ7Z569 592 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 SLITRK6Q9H5Y7 841 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 MAGI1Q96QZ7 1491 aaPredicted RBP12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 RHOXF2BP0C7M4 288 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 FAM76AQ8TAV0 307 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 RHOXF2Q9BQY4 288 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 ADGRL2O95490 1459 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 APOBRQ0VD83 1088 aa12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 UTP11Q9Y3A2 253 aaKnown RBP12.28□□□□□ -0.44
CACNA1C-212ENST00000399621 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 EBAG9O00559 213 aa12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 SPDYE6P0CI01 402 aa12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 KSR2Q6VAB6 950 aa12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 LUC7L2Q9Y383 392 aaKnown RBP12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 PRAG1Q86YV5 1406 aa12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 CASQ2O14958 399 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 GKAP1Q5VSY0 366 aaPredicted RBP12.27□□□□□ -0.44
CACNA1C-212ENST00000399621 FAM170AA1A519 330 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 TYW5A2RUC4 315 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 DNM1Q05193 864 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 UBL4BQ8N7F7 174 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 NOC4LQ9BVI4 516 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 POLR3AO14802 1390 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 GBP1P32455 592 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 DNAJC21Q5F1R6 531 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 PLCH2O75038 1416 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 PLCD1P51178 756 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 YARSP54577 528 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 IQUBQ8NA54 791 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 RSRC1Q96IZ7 334 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 ZKSCAN3Q9BRR0 538 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 MOSPD1Q9UJG1 213 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 ARHGEF35A5YM69 484 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 CFBP00751 764 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 ATICP31939 592 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 ATP8B2P98198 1209 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 TTC31Q49AM3 519 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 DALRD3Q5D0E6 543 aaKnown RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 FAM180AQ6UWF9 173 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 NOX5Q96PH1 765 aa12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 CCDC94Q9BW85 323 aaPredicted RBP12.27□□□□□ -0.45
CACNA1C-212ENST00000399621 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 SF3A3Q12874 501 aaKnown RBP eCLIP12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 PRR16Q569H4 304 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 CNGA4Q8IV77 575 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 CCNT1O60563 726 aaKnown RBP12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 GTF2IP78347 998 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 NEDD9Q14511 834 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 CNNM4Q6P4Q7 775 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 TTC41PQ6P2S7 1318 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 TAOK1Q7L7X3 1001 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 SLC7A5P2Q9GIP4 190 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 TRAF5O00463 557 aa12.26□□□□□ -0.45
CACNA1C-212ENST00000399621 PDE1AP54750 535 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms