RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 TUBB4AP04350 444 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 UBASH3AP57075 661 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 POSTNQ15063 836 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 NT5DC1Q5TFE4 455 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 ENAHQ8N8S7 591 aaPredicted RBP26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 FAM84BQ96KN1 310 aaPredicted RBP26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 SCN7AQ01118 1682 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 SERPINC1P01008 464 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 NR5A1Q13285 461 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 C3orf67Q6ZVT6 689 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 IQCA1Q86XH1 822 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 ZNF592Q92610 1267 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 PCDHB6Q9Y5E3 794 aa26.48■■□□□ 1.83
RABGGTA-202ENST00000399409 IFIT1BQ5T764 474 aaKnown RBP26.47■■□□□ 1.83
RABGGTA-202ENST00000399409 TMED8Q6PL24 325 aaPredicted RBP26.47■■□□□ 1.83
RABGGTA-202ENST00000399409 FBXO33Q7Z6M2 555 aa26.47■■□□□ 1.83
RABGGTA-202ENST00000399409 CMTR1Q8N1G2 835 aaKnown RBP26.47■■□□□ 1.83
RABGGTA-202ENST00000399409 TRIML1Q8N9V2 468 aa26.47■■□□□ 1.83
RABGGTA-202ENST00000399409 TRMT1Q9NXH9 659 aaKnown RBP26.47■■□□□ 1.83
RABGGTA-202ENST00000399409 ATP1A3P13637 1013 aa26.46■■□□□ 1.83
RABGGTA-202ENST00000399409 MLKLQ8NB16 471 aa26.46■■□□□ 1.83
RABGGTA-202ENST00000399409 LINC00116Q8NCU8 138 aa26.46■■□□□ 1.83
RABGGTA-202ENST00000399409 KIF18AQ8NI77 898 aa26.46■■□□□ 1.83
RABGGTA-202ENST00000399409 CCP110O43303 1012 aa26.46■■□□□ 1.83
RABGGTA-202ENST00000399409 CNTNAP4Q9C0A0 1308 aa26.46■■□□□ 1.83
RABGGTA-202ENST00000399409 DDAH1O94760 285 aa26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 BMP15O95972 392 aa26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 DYNLL1P63167 89 aaKnown RBP26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 NCBP1Q09161 790 aaKnown RBP26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 OXER1Q8TDS5 423 aa26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 CCDC34Q96HJ3 373 aa26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 CABP5Q9NP86 173 aa26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 MAN1B1Q9UKM7 699 aa26.45■■□□□ 1.83
RABGGTA-202ENST00000399409 MYH6P13533 1939 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 TRIM75PA6NK02 468 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 POLR2DO15514 142 aaKnown RBP26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 KCNQ2O43526 872 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 KRT2P35908 639 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 SARSP49591 514 aaKnown RBP26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 FUT2Q10981 343 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 E4F1Q66K89 784 aaPredicted RBP26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 SMARCE1Q969G3 411 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 PHF20Q9BVI0 1012 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 NYXQ9GZU5 481 aa26.45■■□□□ 1.82
RABGGTA-202ENST00000399409 GTF2E1P29083 439 aaPredicted RBP26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 PKN1Q16512 942 aa26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 SPECC1Q5M775 1068 aa26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 VSTM4Q8IW00 320 aa26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 SERTAD1Q9UHV2 236 aa26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 DLEC1Q9Y238 1755 aa26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 PRKCSHP14314 528 aaPredicted RBP26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 CFAP100Q494V2 611 aa26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 CTR9Q6PD62 1173 aa26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 AATFQ9NY61 560 aaKnown RBP eCLIP26.44■■□□□ 1.82
RABGGTA-202ENST00000399409 ORC4O43929 436 aa26.43■■□□□ 1.82
RABGGTA-202ENST00000399409 GRIN1Q05586 938 aa26.43■■□□□ 1.82
RABGGTA-202ENST00000399409 ANKRD2Q9GZV1 360 aa26.43■■□□□ 1.82
RABGGTA-202ENST00000399409 BRMS1Q9HCU9 246 aa26.43■■□□□ 1.82
RABGGTA-202ENST00000399409 FANCLQ9NW38 375 aa26.43■■□□□ 1.82
RABGGTA-202ENST00000399409 CASZ1Q86V15 1759 aa26.43■■□□□ 1.82
RABGGTA-202ENST00000399409 BMP6P22004 513 aa26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 MORC3Q14149 939 aa26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 CELF1Q92879 486 aaKnown RBP26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 PPP1R13BQ96KQ4 1090 aa26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 FOXN1O15353 648 aa26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 PPP4R3BQ5MIZ7 849 aa26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 NSUN4Q96CB9 384 aaKnown RBP26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.42■■□□□ 1.82
RABGGTA-202ENST00000399409 ZBTB22O15209 634 aa26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 ACTN4O43707 911 aaKnown RBP26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 RPS8P62241 208 aaKnown RBP26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 CT47A1Q5JQC4 288 aaPredicted RBP26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 ENOX1Q8TC92 643 aaKnown RBP26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 ZNF384Q8TF68 577 aa26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 DPF2Q92785 391 aa26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 CRNKL1Q9BZJ0 848 aaKnown RBP26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 CSRNP2Q9H175 543 aa26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 PDE4BQ07343 736 aa26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 TROAPQ12815 778 aa26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 VPS54Q9P1Q0 977 aa26.41■■□□□ 1.82
RABGGTA-202ENST00000399409 MYH2Q9UKX2 1941 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 WTIPA6NIX2 430 aaPredicted RBP26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 FERMT2Q96AC1 680 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 V9GY48 417 aaPredicted RBP26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 CYP2D7A0A087X1C5 515 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 TOP1P11387 765 aaKnown RBP26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 TBC1D9BQ66K14 1250 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 TMTC3Q6ZXV5 915 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 SPATA20Q8TB22 786 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 NLRP3Q96P20 1036 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 ATP8A2Q9NTI2 1148 aa26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 CGNQ9P2M7 1197 aaKnown RBP26.4■■□□□ 1.82
RABGGTA-202ENST00000399409 USP17L12C9JPN9 530 aa26.39■■□□□ 1.82
RABGGTA-202ENST00000399409 USP17L21D6R901 530 aa26.39■■□□□ 1.82
RABGGTA-202ENST00000399409 ATP2B1P20020 1258 aa26.39■■□□□ 1.82
RABGGTA-202ENST00000399409 RC3H1Q5TC82 1133 aaKnown RBP26.39■■□□□ 1.82
RABGGTA-202ENST00000399409 SHISA4Q96DD7 197 aa26.39■■□□□ 1.82
RABGGTA-202ENST00000399409 TMX1Q9H3N1 280 aa26.39■■□□□ 1.82
RABGGTA-202ENST00000399409 BAZ2AQ9UIF9 1905 aaKnown RBP26.39■■□□□ 1.81
RABGGTA-202ENST00000399409 PRR29P0C7W0 189 aa26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms