RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SHMT1P34896 483 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 GABPAQ06546 454 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 DGKZQ13574 1117 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 LRRFIP1Q32MZ4 808 aaKnown RBP16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 GPAT2Q6NUI2 795 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 SLC44A5Q8NCS7 719 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ZNF280CQ8ND82 737 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ZBTB21Q9ULJ3 1066 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 PHIPQ8WWQ0 1821 aa16.93■□□□□ 0.3
HLA-DQB1-202ENST00000399079 TRIM6-TRIM34B2RNG4 842 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 PDHXO00330 501 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 FKTNO75072 461 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 GH2P01242 217 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 CERKLQ49MI3 558 aaPredicted RBP16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 NOM1Q5C9Z4 860 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 CTR9Q6PD62 1173 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 GADL1Q6ZQY3 521 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ANKRD23Q86SG2 305 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ATAD5Q96QE3 1844 aa16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 BAZ2AQ9UIF9 1905 aaKnown RBP16.92■□□□□ 0.3
HLA-DQB1-202ENST00000399079 PDE4AP27815 886 aa16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 C12orf60Q5U649 245 aa16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 RILPL2Q969X0 211 aa16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ZFYVE28Q9HCC9 887 aa16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 HMGCS2P54868 508 aa16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 FASTKD5Q7L8L6 764 aaKnown RBP16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ZCCHC17Q9NP64 241 aaKnown RBP16.91■□□□□ 0.3
HLA-DQB1-202ENST00000399079 TLR2O60603 784 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 APPP05067 770 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 CYP2C8P10632 490 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 MTMR2Q13614 643 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 ABCB5Q2M3G0 1257 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 TREML2Q5T2D2 321 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 MCOLN1Q9GZU1 580 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 AS3MTQ9HBK9 375 aa16.9■□□□□ 0.3
HLA-DQB1-202ENST00000399079 PTPRFP10586 1907 aa16.89■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CAP1Q01518 475 aa16.89■□□□□ 0.29
HLA-DQB1-202ENST00000399079 AMOTL1Q8IY63 956 aa16.89■□□□□ 0.29
HLA-DQB1-202ENST00000399079 STK11IPQ8N1F8 1099 aa16.89■□□□□ 0.29
HLA-DQB1-202ENST00000399079 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
HLA-DQB1-202ENST00000399079 WDR18Q9BV38 432 aa16.89■□□□□ 0.29
HLA-DQB1-202ENST00000399079 TBC1D2Q9BYX2 928 aa16.89■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CENPFP49454 3210 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 PATL2C9JE40 543 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 MPHOSPH10O00566 681 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 GNAT2P19087 354 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CDK8P49336 464 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 BACE1P56817 501 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 SP3Q02447 781 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CTU1Q7Z7A3 348 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 GINM1Q9NU53 330 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CPA4Q9UI42 421 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 HTTP42858 3142 aa16.88■□□□□ 0.29
HLA-DQB1-202ENST00000399079 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 MINDY4BA8MYZ0 360 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 FOXP2O15409 715 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 GUCY1A2P33402 732 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 TDO2P48775 406 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 SEPT2Q15019 361 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 SH3D19Q5HYK7 790 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 GIMAP6Q6P9H5 292 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 C16orf86Q6ZW13 317 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 IFNL3Q8IZI9 196 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CD99L2Q8TCZ2 262 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CABP5Q9NP86 173 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 SWAP70Q9UH65 585 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 AGTPBP1Q9UPW5 1226 aa16.87■□□□□ 0.29
HLA-DQB1-202ENST00000399079 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CAPN15O75808 1086 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 SBK1Q52WX2 424 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 IFFO2Q5TF58 517 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 VPS53Q5VIR6 699 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 PROCA1Q8NCQ7 364 aaPredicted RBP16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 AKR1B1P15121 316 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ZYXQ15942 572 aaKnown RBP16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 C17orf99Q6UX52 265 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 CLEC10AQ8IUN9 316 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ABHD8Q96I13 439 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 PARK7Q99497 189 aaKnown RBP16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 HELLSQ9NRZ9 838 aa16.86■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ADGRA2Q96PE1 1338 aa16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 C19orf81C9J6K1 198 aa16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 SDSP20132 328 aa16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 ERO1AQ96HE7 468 aa16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 EMILIN3Q9NT22 766 aa16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 SLC45A1Q9Y2W3 748 aa16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 TRIM17Q9Y577 477 aa16.85■□□□□ 0.29
HLA-DQB1-202ENST00000399079 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
HLA-DQB1-202ENST00000399079 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms