RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 ZBTB7AO95365 584 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 ARHGAP44Q17R89 818 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 HS2ST1Q7LGA3 356 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 MMS19Q96T76 1030 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 CARD6Q9BX69 1037 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 RBSNQ9H1K0 784 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 AZI2Q9H6S1 392 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 PLEKHH1Q9ULM0 1364 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 M0QZ92 97 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 NUCB1Q02818 461 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 SULF1Q8IWU6 871 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 LMNTD2Q8IXW0 634 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 PSMA7O14818 248 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 OAS2P29728 719 aaKnown RBP10.42□□□□□ -0.74
ATL3-201ENST00000398868 GBP1P32455 592 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 ITKQ08881 620 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 NEDD9Q14511 834 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 CASC4Q6P4E1 433 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 PPFIBP2Q8ND30 876 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 MLXIPQ9HAP2 919 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 ZBED4O75132 1171 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 CIB2O75838 187 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 CFAP157Q5JU67 520 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 EHBP1Q8NDI1 1231 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 TBC1D31Q96DN5 1066 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.42□□□□□ -0.74
ATL3-201ENST00000398868 DENND2AQ9ULE3 1009 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 ZMYM3Q14202 1370 aa10.42□□□□□ -0.74
ATL3-201ENST00000398868 SNX16P57768 344 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 ATP8B2P98198 1209 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 SEPT10Q9P0V9 454 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 SYCP2Q9BX26 1530 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 SPTLC2O15270 562 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 HSPA1LP34931 641 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 PDE4DQ08499 809 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 DCLK2Q8N568 766 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 TRIM7Q9C029 511 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 CD19P15391 556 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 WDR44Q5JSH3 913 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 RPAINQ86UA6 219 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 VPS54Q9P1Q0 977 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 TOP2BQ02880 1626 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 ARHGEF35A5YM69 484 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 SESN3P58005 492 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 PUM3Q15397 648 aaKnown RBP10.41□□□□□ -0.74
ATL3-201ENST00000398868 B4DLN1 442 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 GPAA1O43292 621 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 MRPL12P52815 198 aaKnown RBP10.41□□□□□ -0.74
ATL3-201ENST00000398868 KIF5AQ12840 1032 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 IFI16Q16666 785 aaKnown RBP10.41□□□□□ -0.74
ATL3-201ENST00000398868 USPL1Q5W0Q7 1092 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 TTLL7Q6ZT98 887 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 TTC6Q86TZ1 520 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 RMND1Q9NWS8 449 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 POLR2DO15514 142 aaKnown RBP10.41□□□□□ -0.74
ATL3-201ENST00000398868 SREK1Q8WXA9 508 aaKnown RBP10.41□□□□□ -0.74
ATL3-201ENST00000398868 SUCLG2Q96I99 432 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 SWAP70Q9UH65 585 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 ZNF532Q9HCE3 1301 aa10.41□□□□□ -0.74
ATL3-201ENST00000398868 EFCAB5A4FU69 1503 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 PLCG2P16885 1265 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 CAPN12Q6ZSI9 719 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 CEP128Q6ZU80 1094 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
ATL3-201ENST00000398868 KIAA0586Q9BVV6 1533 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 BZW2Q9Y6E2 419 aaKnown RBP10.4□□□□□ -0.74
ATL3-201ENST00000398868 SAT1P21673 171 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 IFT74Q96LB3 600 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 ANKFY1Q9P2R3 1169 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 SCYL2Q6P3W7 929 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 DDX21Q9NR30 783 aaKnown RBP eCLIP10.4□□□□□ -0.74
ATL3-201ENST00000398868 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.74
ATL3-201ENST00000398868 PDE8AO60658 829 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 PRPF6O94906 941 aaKnown RBP10.4□□□□□ -0.74
ATL3-201ENST00000398868 RXRBP28702 533 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 MAN1A1P33908 653 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 SATB1Q01826 763 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 LLGL1Q15334 1064 aa10.4□□□□□ -0.74
ATL3-201ENST00000398868 MRPL44Q9H9J2 332 aaKnown RBP10.4□□□□□ -0.74
ATL3-201ENST00000398868 LUC7L2Q9Y383 392 aaKnown RBP10.4□□□□□ -0.74
ATL3-201ENST00000398868 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
ATL3-201ENST00000398868 BNIP3LO60238 219 aa10.4□□□□□ -0.75
ATL3-201ENST00000398868 KIF22Q14807 665 aa10.4□□□□□ -0.75
ATL3-201ENST00000398868 SKIV2LQ15477 1246 aaKnown RBP10.4□□□□□ -0.75
ATL3-201ENST00000398868 BRDTQ58F21 947 aaPredicted RBP10.4□□□□□ -0.75
ATL3-201ENST00000398868 KIF9Q9HAQ2 790 aa10.4□□□□□ -0.75
ATL3-201ENST00000398868 HMG20BQ9P0W2 317 aa10.4□□□□□ -0.75
ATL3-201ENST00000398868 POLIQ9UNA4 740 aa10.4□□□□□ -0.75
ATL3-201ENST00000398868 MARK3P27448 753 aa10.4□□□□□ -0.75
ATL3-201ENST00000398868 ANKRD35Q8N283 1001 aa10.4□□□□□ -0.75
ATL3-201ENST00000398868 ZBTB12Q9Y330 459 aaPredicted RBP10.4□□□□□ -0.75
ATL3-201ENST00000398868 TNNI1P19237 187 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 CYP2J2P51589 502 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 TFAP4Q01664 338 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 SV2BQ7L1I2 683 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 CACNA2D3Q8IZS8 1091 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 SKA2Q8WVK7 121 aaPredicted RBP10.39□□□□□ -0.75
ATL3-201ENST00000398868 SH3TC1Q8TE82 1336 aa10.39□□□□□ -0.75
ATL3-201ENST00000398868 GDF11O95390 407 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms