RNA–Protein interactions for RNA: ENST00000398367.1

UBASH3A-203, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-203ENST00000398367 ZNRF3Q9ULT6 936 aa17.06■□□□□ 0.32
UBASH3A-203ENST00000398367 VIL1P09327 827 aaKnown RBP17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 PTGER2P43116 358 aa17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 CDK8P49336 464 aa17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 RBM5P52756 815 aaKnown RBP eCLIP17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 NUP133Q8WUM0 1156 aa17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 C8orf76Q96K31 380 aa17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 DDX49Q9Y6V7 483 aaKnown RBP17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
UBASH3A-203ENST00000398367 FMNL1O95466 1100 aaPredicted RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 MBD3O95983 291 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 RASA1P20936 1047 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 KRT85P78386 507 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 SSRP1Q08945 709 aaKnown RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 RESTQ13127 1097 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 FOXD4L6Q3SYB3 417 aaPredicted RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 FOXD4L3Q6VB84 417 aaPredicted RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 FERMT3Q86UX7 667 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 TRIM22Q8IYM9 498 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 IDI2Q9BXS1 227 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 SWAP70Q9UH65 585 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 NCLP19338 710 aaKnown RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 DNM1Q05193 864 aaKnown RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 TROAPQ12815 778 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 HDAC9Q9UKV0 1011 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 FOCADQ5VW36 1801 aa17.04■□□□□ 0.32
UBASH3A-203ENST00000398367 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
UBASH3A-203ENST00000398367 GABPAQ06546 454 aa17.03■□□□□ 0.32
UBASH3A-203ENST00000398367 GSE1Q14687 1217 aa17.03■□□□□ 0.32
UBASH3A-203ENST00000398367 ALG1Q9BT22 464 aa17.03■□□□□ 0.32
UBASH3A-203ENST00000398367 EHD4Q9H223 541 aa17.03■□□□□ 0.32
UBASH3A-203ENST00000398367 KAT14Q9H8E8 782 aa17.03■□□□□ 0.32
UBASH3A-203ENST00000398367 PSMD14O00487 310 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 ATL3Q6DD88 541 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 KLHL34Q8N239 644 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 SLC44A5Q8NCS7 719 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 AGBL3Q8NEM8 1001 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 NEDD1Q8NHV4 660 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 MAP3K14Q99558 947 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 SCAND2PQ9GZW5 306 aaPredicted RBP17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 IL17RBQ9NRM6 502 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 LTBP3Q9NS15 1303 aa17.02■□□□□ 0.32
UBASH3A-203ENST00000398367 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.31
UBASH3A-203ENST00000398367 PLIN4Q96Q06 1357 aa17.02■□□□□ 0.31
UBASH3A-203ENST00000398367 NMT2O60551 498 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 RAD17O75943 681 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 DEXIO95424 95 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 TRIM29Q14134 588 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 CFAP100Q494V2 611 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 CRACR2BQ8N4Y2 399 aaPredicted RBP17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 OGFOD1Q8N543 542 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 JDP2Q8WYK2 163 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 PHKBQ93100 1093 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 GMLQ99445 158 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 COL4A5P29400 1685 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 KIF5BP33176 963 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 MMP14P50281 582 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 CFAP45Q9UL16 551 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 ELP1O95163 1332 aa17.01■□□□□ 0.31
UBASH3A-203ENST00000398367 FIBPO43427 364 aa17■□□□□ 0.31
UBASH3A-203ENST00000398367 FOSBP53539 338 aa17■□□□□ 0.31
UBASH3A-203ENST00000398367 NFIAQ12857 509 aa17■□□□□ 0.31
UBASH3A-203ENST00000398367 BRAPQ7Z569 592 aa17■□□□□ 0.31
UBASH3A-203ENST00000398367 NBPF11Q86T75 865 aa17■□□□□ 0.31
UBASH3A-203ENST00000398367 PSME4Q14997 1843 aa17■□□□□ 0.31
UBASH3A-203ENST00000398367 BRCA1P38398 1863 aaKnown RBP17■□□□□ 0.31
UBASH3A-203ENST00000398367 COL2A1P02458 1487 aaPredicted RBP17■□□□□ 0.31
UBASH3A-203ENST00000398367 ADAMTSL1Q8N6G6 1762 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 NFKBIEO00221 500 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 ENTPD3O75355 529 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 UBE2HP62256 183 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 AKAP17AQ02040 695 aaKnown RBP16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 PNMA1Q8ND90 353 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 ZNF396Q96N95 335 aaPredicted RBP16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 GDPD2Q9HCC8 539 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 NOVP48745 357 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 PPP4R3BQ5MIZ7 849 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 CIAPIN1Q6FI81 312 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 TMTC3Q6ZXV5 915 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 SPON1Q9HCB6 807 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 FAM198AQ9UFP1 575 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 PCDHAC2Q9Y5I4 1007 aa16.99■□□□□ 0.31
UBASH3A-203ENST00000398367 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms