RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 ANO1Q5XXA6 986 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 TMTC3Q6ZXV5 915 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 TXNRD3Q86VQ6 643 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.55□□□□□ -1.04
RGPD1-201ENST00000398193 TRAPPC10P48553 1259 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 SLC39A14Q15043 492 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 DPP8Q6V1X1 898 aaPredicted RBP8.55□□□□□ -1.04
RGPD1-201ENST00000398193 DAGLBQ8NCG7 672 aa8.55□□□□□ -1.04
RGPD1-201ENST00000398193 ORC2Q13416 577 aaPredicted RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 SH3RF3Q8TEJ3 882 aaPredicted RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 MRPS27Q92552 414 aaKnown RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 PGBD1Q96JS3 809 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 PYM1Q9BRP8 204 aaKnown RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 RBSNQ9H1K0 784 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 SYNPO2Q9UMS6 1093 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 IQSEC3Q9UPP2 1182 aaPredicted RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 CUTAO60888 179 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 CMA1P23946 247 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 TEX2Q8IWB9 1127 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 TNMDQ9H2S6 317 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 GPHNQ9NQX3 736 aaPredicted RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 FUT2Q10981 343 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 C2CD5Q86YS7 1000 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 CTCFLQ8NI51 663 aaPredicted RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 BPIFA3Q9BQP9 254 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 STRIP1Q5VSL9 837 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 MICU3Q86XE3 530 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 CCAR1Q8IX12 1150 aaKnown RBP8.54□□□□□ -1.04
RGPD1-201ENST00000398193 PHF20Q9BVI0 1012 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 MCM9Q9NXL9 1143 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 MYH1P12882 1939 aa8.54□□□□□ -1.04
RGPD1-201ENST00000398193 SPTLC2O15270 562 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 MYO1BO43795 1136 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 MMP10P09238 476 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 STK38Q15208 465 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 NOSTRINQ8IVI9 506 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 SLC26A6Q9BXS9 759 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 KRT2P35908 639 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 RRP12Q5JTH9 1297 aaKnown RBP8.53□□□□□ -1.04
RGPD1-201ENST00000398193 MFSD14BQ5SR56 506 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 USP28Q96RU2 1077 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 ZC3H12CQ9C0D7 883 aaKnown RBP8.53□□□□□ -1.04
RGPD1-201ENST00000398193 KAT14Q9H8E8 782 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 FLT1P17948 1338 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 RHBDL3P58872 404 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 TROAPQ12815 778 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 FERMT3Q86UX7 667 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 ENGASEQ8NFI3 743 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 BICD2Q8TD16 824 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 FBXO41Q8TF61 875 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 TOMM22Q9NS69 142 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 CCDC39Q9UFE4 941 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 NOL7Q9UMY1 257 aaKnown RBP8.53□□□□□ -1.04
RGPD1-201ENST00000398193 BAZ2AQ9UIF9 1905 aaKnown RBP8.53□□□□□ -1.04
RGPD1-201ENST00000398193 CALML3P27482 149 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 GNL2Q13823 731 aaKnown RBP8.53□□□□□ -1.04
RGPD1-201ENST00000398193 TEX11Q8IYF3 940 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
RGPD1-201ENST00000398193 DHX8Q14562 1220 aaKnown RBP8.52□□□□□ -1.04
RGPD1-201ENST00000398193 ZNF444Q8N0Y2 327 aaPredicted RBP8.52□□□□□ -1.04
RGPD1-201ENST00000398193 CNTNAP5Q8WYK1 1306 aa8.52□□□□□ -1.04
RGPD1-201ENST00000398193 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 CT47A1Q5JQC4 288 aaPredicted RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 HOOK1Q9UJC3 728 aaKnown RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 STX1AQ16623 288 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 PFKFB3Q16875 520 aaPredicted RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 CCDC148Q8NFR7 591 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 FAM200AQ8TCP9 573 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 ZDHHC15Q96MV8 337 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 TSPY2A6NKD2 308 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 KIF28PB7ZC32 967 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 KINO60870 393 aaKnown RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 RESP18Q5W5W9 173 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 SASS6Q6UVJ0 657 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 RTKN2Q8IZC4 609 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 CCDC12Q8WUD4 166 aaPredicted RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 PSMD1Q99460 953 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 SPZ1Q9BXG8 430 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 DHX36Q9H2U1 1008 aaKnown RBP8.52□□□□□ -1.05
RGPD1-201ENST00000398193 SENP2Q9HC62 589 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 DAGLAQ9Y4D2 1042 aa8.52□□□□□ -1.05
RGPD1-201ENST00000398193 WTIPA6NIX2 430 aaPredicted RBP8.51□□□□□ -1.05
RGPD1-201ENST00000398193 CDC25BP30305 580 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 BAG6P46379 1132 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 SEMA3FQ13275 785 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 SNW1Q13573 536 aaKnown RBP8.51□□□□□ -1.05
RGPD1-201ENST00000398193 PTPAQ15257 358 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 NAT10Q9H0A0 1025 aaKnown RBP8.51□□□□□ -1.05
RGPD1-201ENST00000398193 SERPINA10Q9UK55 444 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 PCDHA7Q9UN72 937 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 TSPY3P0CV98 308 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 TSPY8P0CW00 308 aa8.51□□□□□ -1.05
RGPD1-201ENST00000398193 TOP1P11387 765 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms