RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 CXCL11O14625 94 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 INHAP05111 366 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 SLC5A1P13866 664 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 PBX2P40425 430 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 FCGRTP55899 365 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 TRIM32Q13049 653 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 TREML2Q5T2D2 321 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 PRRT2Q7Z6L0 340 aaPredicted RBP10.02□□□□□ -0.81
NUP98-206ENST00000397013 PACS2Q86VP3 889 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 SLC17A8Q8NDX2 589 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 HOOK2Q96ED9 719 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 PARK7Q99497 189 aaKnown RBP10.02□□□□□ -0.81
NUP98-206ENST00000397013 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
NUP98-206ENST00000397013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.02□□□□□ -0.81
NUP98-206ENST00000397013 DLL1O00548 723 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 LDHBP07195 334 aaKnown RBP10.01□□□□□ -0.81
NUP98-206ENST00000397013 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
NUP98-206ENST00000397013 TIMM10P62072 90 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 UBXN2AP68543 259 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 RRP1BQ14684 758 aaKnown RBP10.01□□□□□ -0.81
NUP98-206ENST00000397013 SCYL3Q8IZE3 742 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 NKX2-3Q8TAU0 364 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 ZNF384Q8TF68 577 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 PAWRQ96IZ0 340 aaKnown RBP10.01□□□□□ -0.81
NUP98-206ENST00000397013 HTATIP2Q9BUP3 242 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 GTF3C3Q9Y5Q9 886 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 ARAP2Q8WZ64 1704 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 MAST3O60307 1309 aa10.01□□□□□ -0.81
NUP98-206ENST00000397013 RPAP1Q9BWH6 1393 aaPredicted RBP10.01□□□□□ -0.81
NUP98-206ENST00000397013 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
NUP98-206ENST00000397013 ARHGAP33O14559 1287 aa10□□□□□ -0.81
NUP98-206ENST00000397013 TNPO2O14787 897 aaKnown RBP10□□□□□ -0.81
NUP98-206ENST00000397013 MAP3K10Q02779 954 aa10□□□□□ -0.81
NUP98-206ENST00000397013 PICALMQ13492 652 aa10□□□□□ -0.81
NUP98-206ENST00000397013 ATP2B3Q16720 1220 aa10□□□□□ -0.81
NUP98-206ENST00000397013 ZSCAN29Q8IWY8 852 aaPredicted RBP10□□□□□ -0.81
NUP98-206ENST00000397013 PICK1Q9NRD5 415 aa10□□□□□ -0.81
NUP98-206ENST00000397013 ZMYND8Q9ULU4 1186 aaPredicted RBP10□□□□□ -0.81
NUP98-206ENST00000397013 ZNF521Q96K83 1311 aa10□□□□□ -0.81
NUP98-206ENST00000397013 KIF16BQ96L93 1317 aa10□□□□□ -0.81
NUP98-206ENST00000397013 SYN1P17600 705 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 TBC1D9Q6ZT07 1266 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 Q7L0L9 218 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 FASTKD5Q7L8L6 764 aaKnown RBP9.99□□□□□ -0.81
NUP98-206ENST00000397013 PHOX2BQ99453 314 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 IDI2Q9BXS1 227 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 PAK6Q9NQU5 681 aaPredicted RBP9.99□□□□□ -0.81
NUP98-206ENST00000397013 CEP126Q9P2H0 1117 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 ABCF2Q9UG63 623 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 NR2E3Q9Y5X4 410 aa9.99□□□□□ -0.81
NUP98-206ENST00000397013 LRRFIP2Q9Y608 721 aaKnown RBP9.99□□□□□ -0.81
NUP98-206ENST00000397013 BTDP43251 543 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 EMP3P54852 163 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 RHBDL3P58872 404 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 JAG1P78504 1218 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 SPP2Q13103 211 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 RASGRF1Q13972 1273 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 SHROOM1Q2M3G4 852 aaPredicted RBP9.98□□□□□ -0.81
NUP98-206ENST00000397013 VARS2Q5ST30 1063 aaKnown RBP9.98□□□□□ -0.81
NUP98-206ENST00000397013 PI16Q6UXB8 463 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 C7orf61Q8IZ16 206 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 IL27Q8NEV9 243 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 GJD2Q9UKL4 321 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 GAKO14976 1311 aa9.98□□□□□ -0.81
NUP98-206ENST00000397013 ANP32CO43423 234 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 CTNND1O60716 968 aaKnown RBP9.97□□□□□ -0.81
NUP98-206ENST00000397013 ENTPD3O75355 529 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 IRF5Q13568 498 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 SMCR8Q8TEV9 937 aaPredicted RBP9.97□□□□□ -0.81
NUP98-206ENST00000397013 DENND2AQ9ULE3 1009 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 PTPRCP08575 1304 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 SALL1Q9NSC2 1324 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 RFX7Q2KHR2 1363 aa9.97□□□□□ -0.81
NUP98-206ENST00000397013 CIAO1O76071 339 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 HMGCS2P54868 508 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 MDM2Q00987 491 aaPredicted RBP9.96□□□□□ -0.82
NUP98-206ENST00000397013 MECOMQ03112 1051 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 TFCP2Q12800 502 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 DZIP1Q86YF9 867 aaKnown RBP9.96□□□□□ -0.82
NUP98-206ENST00000397013 FAM163AQ96GL9 167 aaPredicted RBP9.96□□□□□ -0.82
NUP98-206ENST00000397013 GDF15Q99988 308 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 ZBED2Q9BTP6 218 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 FAM117AQ9C073 453 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.96□□□□□ -0.82
NUP98-206ENST00000397013 GNL3LQ9NVN8 582 aaKnown RBP9.96□□□□□ -0.82
NUP98-206ENST00000397013 NOB1Q9ULX3 412 aaKnown RBP9.96□□□□□ -0.82
NUP98-206ENST00000397013 AGTPBP1Q9UPW5 1226 aa9.96□□□□□ -0.82
NUP98-206ENST00000397013 GPR75-ASB3A0A0A6YYF3 556 aa9.95□□□□□ -0.82
NUP98-206ENST00000397013 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
NUP98-206ENST00000397013 CYP2B6P20813 491 aa9.95□□□□□ -0.82
NUP98-206ENST00000397013 IL15P40933 162 aaPredicted RBP9.95□□□□□ -0.82
NUP98-206ENST00000397013 SLFN5Q08AF3 891 aa9.95□□□□□ -0.82
NUP98-206ENST00000397013 POTEEQ6S8J3 1075 aa9.95□□□□□ -0.82
NUP98-206ENST00000397013 NECAB2Q7Z6G3 386 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms