RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 TRPM4Q8TD43 1214 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 CLRN2A0PK11 232 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 TSPY2A6NKD2 308 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 B4E1Z4 1266 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 SH2B2O14492 632 aaPredicted RBP10.37□□□□□ -0.75
CCR9-203ENST00000395963 DDAH1O94760 285 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 TEPSINQ96N21 525 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 ZSCAN10Q96SZ4 725 aaPredicted RBP10.37□□□□□ -0.75
CCR9-203ENST00000395963 DEFB129Q9H1M3 183 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 GGA3Q9NZ52 723 aa10.37□□□□□ -0.75
CCR9-203ENST00000395963 SAP30BPQ9UHR5 308 aaKnown RBP10.37□□□□□ -0.75
CCR9-203ENST00000395963 IGKV6D-41A0A0C4DH26 115 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 DDTLA6NHG4 134 aaPredicted RBP10.36□□□□□ -0.75
CCR9-203ENST00000395963 TCP10L2B9ZVM9 353 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 DHX16O60231 1041 aaKnown RBP10.36□□□□□ -0.75
CCR9-203ENST00000395963 KDM4AO75164 1064 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 TSPY3P0CV98 308 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 TSPY8P0CW00 308 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 FGD1P98174 961 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 L1TD1Q5T7N2 865 aaKnown RBP10.36□□□□□ -0.75
CCR9-203ENST00000395963 ANGEL2Q5VTE6 544 aaKnown RBP10.36□□□□□ -0.75
CCR9-203ENST00000395963 SH3BP5LQ7L8J4 393 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 LDHDQ86WU2 507 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 ZNF341Q9BYN7 854 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 ZSWIM5Q9P217 1185 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 CYP2D6P10635 497 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 SHMT1P34896 483 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 NF2P35240 595 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 AK2P54819 239 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 ANTXR2P58335 489 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 CUL4AQ13619 759 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 WTAPQ15007 396 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 SEC23AQ15436 765 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 RCSD1Q6JBY9 416 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 SYNE3Q6ZMZ3 975 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 CDC37L1Q7L3B6 337 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 IGDCC4Q8TDY8 1250 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 LLPHQ9BRT6 129 aaKnown RBP10.36□□□□□ -0.75
CCR9-203ENST00000395963 SH2D4AQ9H788 454 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 CABP5Q9NP86 173 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 RRAGDQ9NQL2 400 aaPredicted RBP10.36□□□□□ -0.75
CCR9-203ENST00000395963 ZNF112Q9UJU3 913 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 PCDHAC2Q9Y5I4 1007 aa10.36□□□□□ -0.75
CCR9-203ENST00000395963 CCDC196A0A1B0GTZ2 297 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 RANBP6O60518 1105 aaKnown RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 HIRAP54198 1017 aaPredicted RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 FKBP1BP68106 108 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 NOL9Q5SY16 702 aaKnown RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 Q6ZUG5 572 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 UPF3BQ9BZI7 483 aaKnown RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 KANSL2Q9H9L4 492 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCR9-203ENST00000395963 TOMM22Q9NS69 142 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 NYAP2Q9P242 653 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 PAPPA2Q9BXP8 1791 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 IFIT3O14879 490 aaKnown RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 CTNND1O60716 968 aaKnown RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 ASNSP08243 561 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 TFAP4Q01664 338 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 TCP10Q12799 353 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 TOB2Q14106 344 aaPredicted RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 MAP3K11Q16584 847 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 CERKLQ49MI3 558 aaPredicted RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 TMEM67Q5HYA8 995 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 FAM177A1Q8N128 213 aaPredicted RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 RBM28Q9NW13 759 aaKnown RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.35□□□□□ -0.75
CCR9-203ENST00000395963 TAF6LQ9Y6J9 622 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 DOCK1Q14185 1865 aa10.35□□□□□ -0.75
CCR9-203ENST00000395963 TNKSO95271 1327 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 CYP2D7A0A087X1C5 515 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 SHTN1A0MZ66 631 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 CCDC69A6NI79 296 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 SMARCA1P28370 1054 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
CCR9-203ENST00000395963 CPLX2Q6PUV4 134 aaKnown RBP10.34□□□□□ -0.75
CCR9-203ENST00000395963 CYB5R4Q7L1T6 521 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 MKL1Q969V6 931 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 LY9Q9HBG7 655 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 CWC22Q9HCG8 908 aaKnown RBP10.34□□□□□ -0.75
CCR9-203ENST00000395963 RBM27Q9P2N5 1060 aaKnown RBP10.34□□□□□ -0.75
CCR9-203ENST00000395963 KIF3AQ9Y496 699 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 POTECB2RU33 542 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 PFKFB2O60825 505 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 CDKL5O76039 1030 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 EGFRP00533 1210 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 TOP1P11387 765 aaKnown RBP10.34□□□□□ -0.75
CCR9-203ENST00000395963 GNAQP50148 359 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 CACNB3P54284 484 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
CCR9-203ENST00000395963 IFIT1BQ5T764 474 aaKnown RBP10.34□□□□□ -0.75
CCR9-203ENST00000395963 LZTS2Q9BRK4 669 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 DNAJC18Q9H819 358 aa10.34□□□□□ -0.75
CCR9-203ENST00000395963 TTLL1O95922 423 aa10.33□□□□□ -0.76
CCR9-203ENST00000395963 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
CCR9-203ENST00000395963 ABCB5Q2M3G0 1257 aa10.33□□□□□ -0.76
CCR9-203ENST00000395963 CATIPQ7Z7H3 387 aa10.33□□□□□ -0.76
CCR9-203ENST00000395963 USP48Q86UV5 1035 aa10.33□□□□□ -0.76
CCR9-203ENST00000395963 ZFPM1Q8IX07 1006 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms