RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 SMIM22K7EJ46 135 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 MECOMQ03112 1051 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 LRRC8AQ8IWT6 810 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
RAE1-203ENST00000395841 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 COL24A1Q17RW2 1714 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 GTF2F1P35269 517 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAE1-203ENST00000395841 CHAF1AQ13111 956 aaPredicted RBP12.98□□□□□ -0.33
RAE1-203ENST00000395841 NFIXQ14938 502 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 IQCA1Q86XH1 822 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
RAE1-203ENST00000395841 KCNH3Q9ULD8 1083 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 CASZ1Q86V15 1759 aa12.98□□□□□ -0.33
RAE1-203ENST00000395841 CYP2D7A0A087X1C5 515 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 IKBKBO14920 756 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 ZBTB22O15209 634 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 CALM1P0DP23 149 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 CALM2P0DP24 149 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 CALM3P0DP25 149 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 AKAP17AQ02040 695 aaKnown RBP12.97□□□□□ -0.33
RAE1-203ENST00000395841 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
RAE1-203ENST00000395841 RBM28Q9NW13 759 aaKnown RBP12.97□□□□□ -0.33
RAE1-203ENST00000395841 XBP1P17861 261 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 NCAPHQ15003 741 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 CRNKL1Q9BZJ0 848 aaKnown RBP12.97□□□□□ -0.33
RAE1-203ENST00000395841 TFCP2L1Q9NZI6 479 aa12.97□□□□□ -0.33
RAE1-203ENST00000395841 USP17L12C9JPN9 530 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 USP17L21D6R901 530 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 ORC4O43929 436 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 PTPREP23469 700 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 NR5A1Q13285 461 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 LONRF3Q496Y0 759 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.33
RAE1-203ENST00000395841 ATP8A2Q9NTI2 1148 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 IMPACTQ9P2X3 320 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 FBXO2Q9UK22 296 aaPredicted RBP12.96□□□□□ -0.33
RAE1-203ENST00000395841 CEP131Q9UPN4 1083 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.33
RAE1-203ENST00000395841 PRPF3O43395 683 aaKnown RBP12.96□□□□□ -0.33
RAE1-203ENST00000395841 DDAH1O94760 285 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 TM4SF1P30408 202 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 GSDMDP57764 484 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 FUT2Q10981 343 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 PNOCQ13519 176 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 METTL16Q86W50 562 aaKnown RBP12.96□□□□□ -0.33
RAE1-203ENST00000395841 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
RAE1-203ENST00000395841 FAM13BQ9NYF5 915 aa12.96□□□□□ -0.33
RAE1-203ENST00000395841 PRDM1O75626 825 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
RAE1-203ENST00000395841 TROAPQ12815 778 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 OSBPL5Q9H0X9 879 aaPredicted RBP12.95□□□□□ -0.34
RAE1-203ENST00000395841 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
RAE1-203ENST00000395841 HOOK1Q9UJC3 728 aaKnown RBP12.95□□□□□ -0.34
RAE1-203ENST00000395841 APBA3O96018 575 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 ARID5BQ14865 1188 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 PKN1Q16512 942 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 PHF20Q9BVI0 1012 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAE1-203ENST00000395841 ARPP21Q9UBL0 812 aaPredicted RBP12.95□□□□□ -0.34
RAE1-203ENST00000395841 PCDHB6Q9Y5E3 794 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 MORC2Q9Y6X9 1032 aaPredicted RBP12.95□□□□□ -0.34
RAE1-203ENST00000395841 IRS2Q9Y4H2 1338 aa12.95□□□□□ -0.34
RAE1-203ENST00000395841 SMC2O95347 1197 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 PRDX5P30044 214 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 SBK1Q52WX2 424 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
RAE1-203ENST00000395841 ISM2Q6H9L7 571 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 MAP7D2Q96T17 732 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
RAE1-203ENST00000395841 XPO4Q9C0E2 1151 aaKnown RBP12.94□□□□□ -0.34
RAE1-203ENST00000395841 PDCL3Q9H2J4 239 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 SRPRBQ9Y5M8 271 aaKnown RBP12.94□□□□□ -0.34
RAE1-203ENST00000395841 IGSF3O75054 1194 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 SKILP12757 684 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 KRT2P35908 639 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 MDM2Q00987 491 aaPredicted RBP12.94□□□□□ -0.34
RAE1-203ENST00000395841 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 SHISA4Q96DD7 197 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
RAE1-203ENST00000395841 PLEKHA8P1O95397 391 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 GYS1P13807 737 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 CCZ1BP86790 482 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 CCZ1P86791 482 aaPredicted RBP12.93□□□□□ -0.34
RAE1-203ENST00000395841 MYL5Q02045 173 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 DHX8Q14562 1220 aaKnown RBP12.93□□□□□ -0.34
RAE1-203ENST00000395841 OLFM4Q6UX06 510 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 VPS54Q9P1Q0 977 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 PCDHA5Q9Y5H7 936 aa12.93□□□□□ -0.34
RAE1-203ENST00000395841 V9GY48 417 aaPredicted RBP12.93□□□□□ -0.34
RAE1-203ENST00000395841 MAST2Q6P0Q8 1798 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms