RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 MYPNQ86TC9 1320 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 ZNF532Q9HCE3 1301 aa19.67■□□□□ 0.74
CXCL12-206ENST00000395795 SMARCA5O60264 1052 aaPredicted RBP19.66■□□□□ 0.74
CXCL12-206ENST00000395795 TTF1Q15361 905 aaPredicted RBP19.66■□□□□ 0.74
CXCL12-206ENST00000395795 CERS3Q8IU89 383 aa19.66■□□□□ 0.74
CXCL12-206ENST00000395795 ANKRD13CQ8N6S4 541 aa19.66■□□□□ 0.74
CXCL12-206ENST00000395795 SHISA4Q96DD7 197 aa19.66■□□□□ 0.74
CXCL12-206ENST00000395795 DNAJC2Q99543 621 aaKnown RBP19.66■□□□□ 0.74
CXCL12-206ENST00000395795 ASCC2Q9H1I8 757 aaPredicted RBP19.66■□□□□ 0.74
CXCL12-206ENST00000395795 BOLA2Q9H3K6 86 aa19.66■□□□□ 0.74
CXCL12-206ENST00000395795 GINM1Q9NU53 330 aa19.66■□□□□ 0.74
CXCL12-206ENST00000395795 HOXA7P31268 230 aaPredicted RBP19.65■□□□□ 0.74
CXCL12-206ENST00000395795 SHMT1P34896 483 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 FCGRTP55899 365 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 FAM110CQ1W6H9 321 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 PRPF38BQ5VTL8 546 aaKnown RBP19.65■□□□□ 0.74
CXCL12-206ENST00000395795 NBPF11Q86T75 865 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 LCORLQ8N3X6 602 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 HAUS7Q99871 368 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 CHMP4BQ9H444 224 aaKnown RBP19.65■□□□□ 0.74
CXCL12-206ENST00000395795 AS3MTQ9HBK9 375 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 EMILIN3Q9NT22 766 aa19.65■□□□□ 0.74
CXCL12-206ENST00000395795 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 PEX10O60683 326 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 MYCP01106 439 aaPredicted RBP19.64■□□□□ 0.73
CXCL12-206ENST00000395795 GH2P01242 217 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 HLA-DOAP06340 250 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 GRK4P32298 578 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 GUCY1A2P33402 732 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 ADD2P35612 726 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 USP5P45974 858 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 CRACR2BQ8N4Y2 399 aaPredicted RBP19.64■□□□□ 0.73
CXCL12-206ENST00000395795 SMCR8Q8TEV9 937 aaPredicted RBP19.64■□□□□ 0.73
CXCL12-206ENST00000395795 DCTPP1Q9H773 170 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 PAG1Q9NWQ8 432 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 SERPINB13Q9UIV8 391 aa19.64■□□□□ 0.73
CXCL12-206ENST00000395795 SMIM22K7EJ46 135 aa19.63■□□□□ 0.73
CXCL12-206ENST00000395795 HOXD10P28358 340 aa19.63■□□□□ 0.73
CXCL12-206ENST00000395795 FLT3LGP49771 235 aa19.63■□□□□ 0.73
CXCL12-206ENST00000395795 LRRCC1Q9C099 1032 aa19.63■□□□□ 0.73
CXCL12-206ENST00000395795 TXNRD2Q9NNW7 524 aa19.63■□□□□ 0.73
CXCL12-206ENST00000395795 DCP1AQ9NPI6 582 aaPredicted RBP19.63■□□□□ 0.73
CXCL12-206ENST00000395795 MORF4L1Q9UBU8 362 aa19.63■□□□□ 0.73
CXCL12-206ENST00000395795 C19orf81C9J6K1 198 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 USP17L10C9JJH3 530 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 PRKAB2O43741 272 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 RAET1EQ8TD07 263 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 SDR42E1Q8WUS8 393 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 P2RX7Q99572 595 aaKnown RBP19.62■□□□□ 0.73
CXCL12-206ENST00000395795 TMEM106CQ9BVX2 250 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 GJD2Q9UKL4 321 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 PNMA3Q9UL41 463 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 PCDHB15Q9Y5E8 787 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 NAV1Q8NEY1 1877 aa19.62■□□□□ 0.73
CXCL12-206ENST00000395795 CYP2D6P10635 497 aa19.61■□□□□ 0.73
CXCL12-206ENST00000395795 GCLCP48506 637 aaPredicted RBP19.61■□□□□ 0.73
CXCL12-206ENST00000395795 IRF5Q13568 498 aa19.61■□□□□ 0.73
CXCL12-206ENST00000395795 UBE2Q1Q7Z7E8 422 aa19.61■□□□□ 0.73
CXCL12-206ENST00000395795 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
CXCL12-206ENST00000395795 C12orf42Q96LP6 360 aa19.61■□□□□ 0.73
CXCL12-206ENST00000395795 BCL11AQ9H165 835 aa19.61■□□□□ 0.73
CXCL12-206ENST00000395795 ARMT1Q9H993 441 aa19.61■□□□□ 0.73
CXCL12-206ENST00000395795 PLXNB2O15031 1838 aa19.6■□□□□ 0.73
CXCL12-206ENST00000395795 ELNP15502 786 aa19.6■□□□□ 0.73
CXCL12-206ENST00000395795 ACER1Q8TDN7 264 aa19.6■□□□□ 0.73
CXCL12-206ENST00000395795 CRNKL1Q9BZJ0 848 aaKnown RBP19.6■□□□□ 0.73
CXCL12-206ENST00000395795 RBPJLQ9UBG7 517 aa19.6■□□□□ 0.73
CXCL12-206ENST00000395795 TNPO2O14787 897 aaKnown RBP19.59■□□□□ 0.73
CXCL12-206ENST00000395795 ADCY3O60266 1144 aa19.59■□□□□ 0.73
CXCL12-206ENST00000395795 CCL5P13501 91 aa19.59■□□□□ 0.73
CXCL12-206ENST00000395795 SLC44A5Q8NCS7 719 aa19.59■□□□□ 0.73
CXCL12-206ENST00000395795 SLAIN1Q8ND83 568 aa19.59■□□□□ 0.73
CXCL12-206ENST00000395795 PXYLP1Q8TE99 480 aa19.59■□□□□ 0.73
CXCL12-206ENST00000395795 TRIM34Q9BYJ4 488 aa19.59■□□□□ 0.73
CXCL12-206ENST00000395795 MBD4O95243 580 aa19.58■□□□□ 0.72
CXCL12-206ENST00000395795 SLC34A2O95436 690 aa19.58■□□□□ 0.72
CXCL12-206ENST00000395795 HERVK_113P62684 666 aa19.58■□□□□ 0.72
CXCL12-206ENST00000395795 PABPC4Q13310 644 aaKnown RBP eCLIP19.58■□□□□ 0.72
CXCL12-206ENST00000395795 UBE3CQ15386 1083 aa19.58■□□□□ 0.72
CXCL12-206ENST00000395795 Q3C1V9 767 aa19.58■□□□□ 0.72
CXCL12-206ENST00000395795 CERKLQ49MI3 558 aaPredicted RBP19.58■□□□□ 0.72
CXCL12-206ENST00000395795 UNC93B1Q9H1C4 597 aa19.58■□□□□ 0.72
CXCL12-206ENST00000395795 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
CXCL12-206ENST00000395795 A0A1W2PRG0 241 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 CNMDO75829 334 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 GJB1P08034 283 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 GJA8P48165 433 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 ABCB5Q2M3G0 1257 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 USP17L2Q6R6M4 530 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 SIAH1Q8IUQ4 282 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 KIAA1683Q9H0B3 1180 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 PUS7LQ9H0K6 701 aaKnown RBP19.57■□□□□ 0.72
CXCL12-206ENST00000395795 TMOD4Q9NZQ9 345 aa19.57■□□□□ 0.72
CXCL12-206ENST00000395795 POLR3DP05423 398 aaPredicted RBP19.56■□□□□ 0.72
CXCL12-206ENST00000395795 SEPT2Q15019 361 aa19.56■□□□□ 0.72
CXCL12-206ENST00000395795 TSHZ3Q63HK5 1081 aa19.56■□□□□ 0.72
CXCL12-206ENST00000395795 DYNLL2Q96FJ2 89 aa19.56■□□□□ 0.72
CXCL12-206ENST00000395795 ECHDC1Q9NTX5 307 aa19.56■□□□□ 0.72
CXCL12-206ENST00000395795 MYH7P12883 1935 aa19.56■□□□□ 0.72
CXCL12-206ENST00000395795 CYP2D7A0A087X1C5 515 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms