RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 STRBPQ96SI9 672 aaKnown RBP16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 ZHX2Q9Y6X8 837 aa16.08■□□□□ 0.16
HLA-DMA-202ENST00000395303 DOCK3Q8IZD9 2030 aa16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 PRKAB2O43741 272 aa16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 ASNSP08243 561 aa16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 CRHR2Q13324 411 aa16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 PLEKHM2Q8IWE5 1019 aa16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 EVI5LQ96CN4 794 aa16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
HLA-DMA-202ENST00000395303 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 JAG1P78504 1218 aa16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 ZMYM1Q5SVZ6 1142 aa16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 PRPF38BQ5VTL8 546 aaKnown RBP16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 GPAT2Q6NUI2 795 aa16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 WDR18Q9BV38 432 aa16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
HLA-DMA-202ENST00000395303 GSG1L2A8MUP6 293 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 GPAA1O43292 621 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 SHMT1P34896 483 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 TAF1CQ15572 869 aaPredicted RBP16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 SLC4A8Q2Y0W8 1093 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 C12orf60Q5U649 245 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 FASTKD5Q7L8L6 764 aaKnown RBP16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 FSD1Q9BTV5 496 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 TRIM34Q9BYJ4 488 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 ZBTB21Q9ULJ3 1066 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 SLC45A1Q9Y2W3 748 aa16.05■□□□□ 0.16
HLA-DMA-202ENST00000395303 ADGRA2Q96PE1 1338 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 M0R2C6 588 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 EVX2Q03828 476 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 SH3D19Q5HYK7 790 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 ZNF280CQ8ND82 737 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 MYH4Q9Y623 1939 aa16.04■□□□□ 0.16
HLA-DMA-202ENST00000395303 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 USP17L21D6R901 530 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 TLR2O60603 784 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 GDF11O95390 407 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 CYP2D6P10635 497 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 GNAT2P19087 354 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 SPP2Q13103 211 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 CTR9Q6PD62 1173 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 PROCA1Q8NCQ7 364 aaPredicted RBP16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 SEC62Q99442 399 aaKnown RBP16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 SWAP70Q9UH65 585 aa16.03■□□□□ 0.16
HLA-DMA-202ENST00000395303 TRIM75PA6NK02 468 aa16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 PDHXO00330 501 aa16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 CERKLQ49MI3 558 aaPredicted RBP16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 C16orf86Q6ZW13 317 aa16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 DDRGK1Q96HY6 314 aa16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 ARPP21Q9UBL0 812 aaPredicted RBP16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 AGTPBP1Q9UPW5 1226 aa16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 PARP14Q460N5 1801 aa16.02■□□□□ 0.16
HLA-DMA-202ENST00000395303 RBBP6Q7Z6E9 1792 aaKnown RBP16.02■□□□□ 0.15
HLA-DMA-202ENST00000395303 CENPFP49454 3210 aa16.02■□□□□ 0.15
HLA-DMA-202ENST00000395303 ROBO3Q96MS0 1386 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 C19orf81C9J6K1 198 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 PATL2C9JE40 543 aaKnown RBP16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 GH2P01242 217 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 PDE4AP27815 886 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 GUCY1A2P33402 732 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 CAP1Q01518 475 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 ABCB5Q2M3G0 1257 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 AMOTL1Q8IY63 956 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 EPB41L4AQ9HCS5 686 aaPredicted RBP16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 HELLSQ9NRZ9 838 aa16.01■□□□□ 0.15
HLA-DMA-202ENST00000395303 MKI67P46013 3256 aaKnown RBP16■□□□□ 0.15
HLA-DMA-202ENST00000395303 RLFQ13129 1914 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 CYP2D7A0A087X1C5 515 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 SMIM22K7EJ46 135 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 CDK8P49336 464 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 BACE1P56817 501 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 SP3Q02447 781 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 C17orf99Q6UX52 265 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 DYNLL2Q96FJ2 89 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 ERO1AQ96HE7 468 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 PCDH10Q9P2E7 1040 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 TRIM17Q9Y577 477 aa16■□□□□ 0.15
HLA-DMA-202ENST00000395303 LAMA4Q16363 1823 aa15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 USP17L10C9JJH3 530 aa15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 FOXP2O15409 715 aa15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 HMGCS2P54868 508 aa15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 SLC44A5Q8NCS7 719 aa15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 CCDC17Q96LX7 622 aa15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 PARK7Q99497 189 aaKnown RBP15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 CABP5Q9NP86 173 aa15.99■□□□□ 0.15
HLA-DMA-202ENST00000395303 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
HLA-DMA-202ENST00000395303 BCRP11274 1271 aa15.98■□□□□ 0.15
HLA-DMA-202ENST00000395303 MTMR2Q13614 643 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms