RNA–Protein interactions for RNA: ENST00000394839.6

PRKACB-208, Transcript of protein kinase cAMP-activated catalytic subunit beta, human

TSL 2 BASIC

Gene PRKACB, Length 4,200 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACB-208	ENST00000394839	SLC15A5	A6NIM6	579 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	CAP2	P40123	477 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	LRIT3	Q3SXY7	679 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	RASEF	Q8IZ41	740 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	MB21D1	Q8N884	522 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	CRISPLD2	Q9H0B8	497 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	SPC25	Q9HBM1	224 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	PAK6	Q9NQU5	681 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	FAM198A	Q9UFP1	575 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	ATRNL1	Q5VV63	1379 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	ARAP2	Q8WZ64	1704 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839		A0A1B0GUL7	405 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	ELN	P15502	786 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	CYP2B6	P20813	491 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	HMGCS2	P54868	508 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	PPP4R3B	Q5MIZ7	849 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	GPAT2	Q6NUI2	795 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	XAGE2	Q96GT9	111 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	PAGR1	Q9BTK6	254 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	ARHGEF10L	Q9HCE6	1279 aa		5.21	□□□□□ -1.58
PRKACB-208	ENST00000394839	HMMR	O75330	724 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	PRKAR2A	P13861	404 aa	Known RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	PHKA1	P46020	1223 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	BACE1	P56817	501 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	FAM109B	Q6ICB4	259 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	DPP9	Q86TI2	863 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	CRNKL1	Q9BZJ0	848 aa	Known RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	USP44	Q9H0E7	712 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	TMEM265	A0A087WTH1	108 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	POLR3D	P05423	398 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	CNGA1	P29973	690 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	HOXA7	P31268	230 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	MAP3K10	Q02779	954 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	NFIA	Q12857	509 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZNF467	Q7Z7K2	595 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	DEFB123	Q8N688	67 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	SSH1	Q8WYL5	1049 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	SHISA4	Q96DD7	197 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	EDC3	Q96F86	508 aa	Known RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	NRBP1	Q9UHY1	535 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	HERVK_113	P62684	666 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	MAP2K5	Q13163	448 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	RNF25	Q96BH1	459 aa	Predicted RBP	5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZNF287	Q9HBT7	754 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	HOXC10	Q9NYD6	342 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	GABRQ	Q9UN88	632 aa		5.2	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZNF646	O15015	1829 aa	Predicted RBP	5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	STRN	O43815	780 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	MECOM	Q03112	1051 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZSCAN25	Q6NSZ9	544 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	OGDHL	Q9ULD0	1010 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	TLR3	O15455	904 aa	Known RBP	5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	RASGRF1	Q13972	1273 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	STAP2	Q9UGK3	403 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	SWAP70	Q9UH65	585 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	COL4A1	P02462	1669 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	CYP7A1	P22680	504 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	PPP4C	P60510	307 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	ERVK-9	P63128	1117 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	ERVK-24	P63145	666 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	MTMR2	Q13614	643 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	SHCBP1	Q8NEM2	672 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	SEZ6L	Q9BYH1	1024 aa		5.19	□□□□□ -1.58
PRKACB-208	ENST00000394839	SLC25A27	O95847	323 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	ARID4A	P29374	1257 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	SLFN5	Q08AF3	891 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	ABCB5	Q2M3G0	1257 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZKSCAN2	Q63HK3	967 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	RNF180	Q86T96	592 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	CDAN1	Q8IWY9	1227 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	MROH8	Q9H579	483 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	ZBTB21	Q9ULJ3	1066 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	KIAA0100	Q14667	2235 aa	Known RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	DNM1L	O00429	736 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	RFX5	P48382	616 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	MTX1	Q13505	466 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	CERKL	Q49MI3	558 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	ATG9A	Q7Z3C6	839 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	UBE2Q1	Q7Z7E8	422 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	KLHDC4	Q8TBB5	520 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	GPATCH3	Q96I76	525 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	CCDC17	Q96LX7	622 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	EHD4	Q9H223	541 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	DDX20	Q9UHI6	824 aa	Known RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	PHF20L1	A8MW92	1017 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	MPHOSPH10	O00566	681 aa	Known RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	MAGEA10	P43363	369 aa	Predicted RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	TFCP2	Q12800	502 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	LPAR1	Q92633	364 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	C12orf42	Q96LP6	360 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	MPHOSPH6	Q99547	160 aa	Known RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	GDF15	Q99988	308 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	SERPINB13	Q9UIV8	391 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	NOB1	Q9ULX3	412 aa	Known RBP	5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	CNPY2	Q9Y2B0	182 aa		5.18	□□□□□ -1.58
PRKACB-208	ENST00000394839	AOX1	Q06278	1338 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms