RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 CHMP4CQ96CF2 233 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 PKNOX2Q96KN3 472 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 BPIFA3Q9BQP9 254 aa15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 ZHX1Q9UKY1 873 aaPredicted RBP15.52■□□□□ 0.08
GTF2F1-201ENST00000394456 LY75O60449 1722 aa15.52■□□□□ 0.07
GTF2F1-201ENST00000394456 NEMFO60524 1076 aa15.52■□□□□ 0.07
GTF2F1-201ENST00000394456 PRDM1O75626 825 aa15.52■□□□□ 0.07
GTF2F1-201ENST00000394456 TRIM29Q14134 588 aa15.52■□□□□ 0.07
GTF2F1-201ENST00000394456 EARS2Q5JPH6 523 aaKnown RBP15.52■□□□□ 0.07
GTF2F1-201ENST00000394456 CNNM3Q8NE01 707 aa15.52■□□□□ 0.07
GTF2F1-201ENST00000394456 NLRP3Q96P20 1036 aa15.52■□□□□ 0.07
GTF2F1-201ENST00000394456 COL1A1P02452 1464 aaPredicted RBP15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 PPP6R2O75170 966 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 CDKL5O76039 1030 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 FMNL1O95466 1100 aaPredicted RBP15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 SFPQP23246 707 aaKnown RBP eCLIP15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 FMR1Q06787 632 aaKnown RBP eCLIP15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 KRBA2Q6ZNG9 492 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 SLC51AQ86UW1 340 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 NOSTRINQ8IVI9 506 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 TMX1Q9H3N1 280 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 COL24A1Q17RW2 1714 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 CPLX2Q6PUV4 134 aaKnown RBP15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 SEPT12Q8IYM1 358 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 MED15Q96RN5 788 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 NYXQ9GZU5 481 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 RAI14Q9P0K7 980 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 SERTAD1Q9UHV2 236 aa15.51■□□□□ 0.07
GTF2F1-201ENST00000394456 SERPINC1P01008 464 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 UBASH3AP57075 661 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 DYNLL1P63167 89 aaKnown RBP15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 ALX1Q15699 326 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 RTN1Q16799 776 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 CFAP100Q494V2 611 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 FAM196AQ6ZSG2 479 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 ZNF804BA4D1E1 1349 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 POLR2DO15514 142 aaKnown RBP15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 MMP1P03956 469 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 CYP7A1P22680 504 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 RFC4P35249 363 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 LIFRP42702 1097 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 GSDMDP57764 484 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 RPS8P62241 208 aaKnown RBP15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 UBE4AQ14139 1066 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 WTAPQ15007 396 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 KMT5BQ4FZB7 885 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
GTF2F1-201ENST00000394456 MYH13Q9UKX3 1938 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 COBLO75128 1261 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 IFNAR1P17181 557 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 MDM2Q00987 491 aaPredicted RBP15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 SLC4A8Q2Y0W8 1093 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 SMAP1Q8IYB5 467 aaPredicted RBP15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 FAM84BQ96KN1 310 aaPredicted RBP15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 LRRC4BQ9NT99 713 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 FBXO2Q9UK22 296 aaPredicted RBP15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 MYL5Q02045 173 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 CAVIN4Q5BKX8 364 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 CABP5Q9NP86 173 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 GNL3LQ9NVN8 582 aaKnown RBP15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 TFCP2L1Q9NZI6 479 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 MAN1B1Q9UKM7 699 aa15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 GOLGB1Q14789 3259 aaKnown RBP15.49■□□□□ 0.07
GTF2F1-201ENST00000394456 A0A087X0B3 334 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 ADAMTS3O15072 1205 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 FAM177A1Q8N128 213 aaPredicted RBP15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 CRACR2BQ8N4Y2 399 aaPredicted RBP15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 KRI1Q8N9T8 703 aaKnown RBP15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 VPS54Q9P1Q0 977 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 IMPACTQ9P2X3 320 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 TNRC6CQ9HCJ0 1690 aaKnown RBP15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 BAZ2AQ9UIF9 1905 aaKnown RBP15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 CUTAO60888 179 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 TRAPPC3LQ5T215 181 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 ZNF654Q8IZM8 581 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 CERKQ8TCT0 537 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 TIGD1Q96MW7 591 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 JAG2Q9Y219 1238 aa15.48■□□□□ 0.07
GTF2F1-201ENST00000394456 IKBKBO14920 756 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 PPARAQ07869 468 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 FBXO38Q6PIJ6 1188 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 KIF18AQ8NI77 898 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 ZNF384Q8TF68 577 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 FAM237AA0A1B0GTK4 181 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 PLEKHA8P1O95397 391 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 JMYQ8N9B5 988 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 STAG1Q8WVM7 1258 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 CACNA1SQ13698 1873 aa15.47■□□□□ 0.07
GTF2F1-201ENST00000394456 NMT2O60551 498 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 ERCC6LQ2NKX8 1250 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 FANCBQ8NB91 859 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 CCDC150Q8NCX0 1101 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 EPSTI1Q96J88 318 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 CSRNP2Q9H175 543 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 TNKSO95271 1327 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 NFIXQ14938 502 aa15.46■□□□□ 0.07
GTF2F1-201ENST00000394456 STAMQ92783 540 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms