RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 IFIT1BQ5T764 474 aaKnown RBP23.77■■□□□ 1.4
HDDC3-202ENST00000394272 FAM217BQ9NTX9 383 aaPredicted RBP23.77■■□□□ 1.4
HDDC3-202ENST00000394272 TCP11L1Q9NUJ3 509 aa23.77■■□□□ 1.4
HDDC3-202ENST00000394272 CDC27P30260 824 aa23.76■■□□□ 1.39
HDDC3-202ENST00000394272 DLGAP5Q15398 846 aa23.76■■□□□ 1.39
HDDC3-202ENST00000394272 LARP1BQ659C4 914 aaKnown RBP23.76■■□□□ 1.39
HDDC3-202ENST00000394272 SYNE3Q6ZMZ3 975 aa23.76■■□□□ 1.39
HDDC3-202ENST00000394272 ZNF654Q8IZM8 581 aa23.76■■□□□ 1.39
HDDC3-202ENST00000394272 DDX11Q96FC9 970 aa23.76■■□□□ 1.39
HDDC3-202ENST00000394272 IL17RBQ9NRM6 502 aa23.76■■□□□ 1.39
HDDC3-202ENST00000394272 MTMR6Q9Y217 621 aa23.76■■□□□ 1.39
HDDC3-202ENST00000394272 GOLGA8AA7E2F4 631 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 ADD1P35611 737 aaKnown RBP23.75■■□□□ 1.39
HDDC3-202ENST00000394272 NBR1Q14596 966 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 RCSD1Q6JBY9 416 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 EHD4Q9H223 541 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 DHX36Q9H2U1 1008 aaKnown RBP23.75■■□□□ 1.39
HDDC3-202ENST00000394272 SERPINB13Q9UIV8 391 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 COL2A1P02458 1487 aaPredicted RBP23.75■■□□□ 1.39
HDDC3-202ENST00000394272 ENTPD3O75355 529 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 HLA-DOAP06340 250 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 TSPY3P0CV98 308 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 TSPY8P0CW00 308 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 ZSCAN22P10073 491 aaPredicted RBP23.75■■□□□ 1.39
HDDC3-202ENST00000394272 RPS12P25398 132 aaKnown RBP23.75■■□□□ 1.39
HDDC3-202ENST00000394272 MMP14P50281 582 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 TCP10Q12799 353 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 ZBED3Q96IU2 234 aaPredicted RBP23.75■■□□□ 1.39
HDDC3-202ENST00000394272 GBP4Q96PP9 640 aa23.75■■□□□ 1.39
HDDC3-202ENST00000394272 ATRNL1Q5VV63 1379 aa23.74■■□□□ 1.39
HDDC3-202ENST00000394272 CPLX1O14810 134 aa23.74■■□□□ 1.39
HDDC3-202ENST00000394272 FDPSP14324 419 aaKnown RBP23.74■■□□□ 1.39
HDDC3-202ENST00000394272 MCM4P33991 863 aa23.74■■□□□ 1.39
HDDC3-202ENST00000394272 EIF6P56537 245 aaKnown RBP23.74■■□□□ 1.39
HDDC3-202ENST00000394272 NTRK3Q16288 839 aa23.74■■□□□ 1.39
HDDC3-202ENST00000394272 SH3BP5LQ7L8J4 393 aa23.74■■□□□ 1.39
HDDC3-202ENST00000394272 ANKS1AQ92625 1134 aa23.74■■□□□ 1.39
HDDC3-202ENST00000394272 SWAP70Q9UH65 585 aa23.74■■□□□ 1.39
HDDC3-202ENST00000394272 FOXD4L5Q5VV16 416 aaPredicted RBP23.73■■□□□ 1.39
HDDC3-202ENST00000394272 ARHGAP27Q6ZUM4 889 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 DGKHQ86XP1 1220 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 CCDC144CPQ8IYA2 1237 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 NEDD1Q8NHV4 660 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 FOXD4L4Q8WXT5 416 aaPredicted RBP23.73■■□□□ 1.39
HDDC3-202ENST00000394272 DDTLA6NHG4 134 aaPredicted RBP23.73■■□□□ 1.39
HDDC3-202ENST00000394272 BAG4O95429 457 aaKnown RBP23.73■■□□□ 1.39
HDDC3-202ENST00000394272 ZNF280AP59817 542 aaPredicted RBP23.73■■□□□ 1.39
HDDC3-202ENST00000394272 TROAPQ12815 778 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 SPDYE2Q495Y8 402 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 CCDC178Q5BJE1 867 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 FAM184AQ8NB25 1140 aa23.73■■□□□ 1.39
HDDC3-202ENST00000394272 PLIN4Q96Q06 1357 aa23.72■■□□□ 1.39
HDDC3-202ENST00000394272 RTN1Q16799 776 aa23.72■■□□□ 1.39
HDDC3-202ENST00000394272 CATIPQ7Z7H3 387 aa23.72■■□□□ 1.39
HDDC3-202ENST00000394272 ZNF70Q9UC06 446 aaPredicted RBP23.72■■□□□ 1.39
HDDC3-202ENST00000394272 KIF3AQ9Y496 699 aa23.72■■□□□ 1.39
HDDC3-202ENST00000394272 LMNB1P20700 586 aa23.71■■□□□ 1.39
HDDC3-202ENST00000394272 PPP2R5BQ15173 497 aa23.71■■□□□ 1.39
HDDC3-202ENST00000394272 FANCBQ8NB91 859 aa23.71■■□□□ 1.39
HDDC3-202ENST00000394272 MYOZ2Q9NPC6 264 aa23.71■■□□□ 1.39
HDDC3-202ENST00000394272 TMOD2Q9NZR1 351 aa23.71■■□□□ 1.39
HDDC3-202ENST00000394272 PI4KBQ9UBF8 816 aa23.71■■□□□ 1.39
HDDC3-202ENST00000394272 TAOK2Q9UL54 1235 aa23.71■■□□□ 1.39
HDDC3-202ENST00000394272 GREB1LQ9C091 1923 aaPredicted RBP23.71■■□□□ 1.39
HDDC3-202ENST00000394272 SHTN1A0MZ66 631 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 PPFIA3O75145 1194 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 CDKL5O76039 1030 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 DDAH1O94760 285 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 F13A1P00488 732 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 SHMT1P34896 483 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 CPLX2Q6PUV4 134 aaKnown RBP23.7■■□□□ 1.39
HDDC3-202ENST00000394272 NUP133Q8WUM0 1156 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 DPF2Q92785 391 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 DNAJC18Q9H819 358 aa23.7■■□□□ 1.39
HDDC3-202ENST00000394272 ZNF541Q9H0D2 1346 aa23.7■■□□□ 1.38
HDDC3-202ENST00000394272 CLRN2A0PK11 232 aa23.7■■□□□ 1.38
HDDC3-202ENST00000394272 FKBP1CQ5VVH2 108 aa23.7■■□□□ 1.38
HDDC3-202ENST00000394272 CDC37L1Q7L3B6 337 aa23.7■■□□□ 1.38
HDDC3-202ENST00000394272 TCHHQ07283 1943 aa23.7■■□□□ 1.38
HDDC3-202ENST00000394272 CCDC196A0A1B0GTZ2 297 aa23.69■■□□□ 1.38
HDDC3-202ENST00000394272 VPS37CA5D8V6 355 aaPredicted RBP23.69■■□□□ 1.38
HDDC3-202ENST00000394272 WNT10BO00744 389 aa23.69■■□□□ 1.38
HDDC3-202ENST00000394272 CALM1P0DP23 149 aa23.69■■□□□ 1.38
HDDC3-202ENST00000394272 CALM2P0DP24 149 aa23.69■■□□□ 1.38
HDDC3-202ENST00000394272 CALM3P0DP25 149 aa23.69■■□□□ 1.38
HDDC3-202ENST00000394272 NOVP48745 357 aa23.69■■□□□ 1.38
HDDC3-202ENST00000394272 GMPSP49915 693 aaPredicted RBP23.69■■□□□ 1.38
HDDC3-202ENST00000394272 METTL16Q86W50 562 aaKnown RBP23.69■■□□□ 1.38
HDDC3-202ENST00000394272 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.69■■□□□ 1.38
HDDC3-202ENST00000394272 ORC3Q9UBD5 711 aaPredicted RBP23.69■■□□□ 1.38
HDDC3-202ENST00000394272 IFNAR1P17181 557 aa23.68■■□□□ 1.38
HDDC3-202ENST00000394272 ZSCAN29Q8IWY8 852 aaPredicted RBP23.68■■□□□ 1.38
HDDC3-202ENST00000394272 YBX3P16989 372 aaKnown RBP eCLIP23.68■■□□□ 1.387e-9■□□□□ 10.7
HDDC3-202ENST00000394272 FOXP4Q8IVH2 680 aaPredicted RBP23.68■■□□□ 1.38
HDDC3-202ENST00000394272 GJA3Q9Y6H8 435 aa23.68■■□□□ 1.38
HDDC3-202ENST00000394272 STK36Q9NRP7 1315 aa23.67■■□□□ 1.38
HDDC3-202ENST00000394272 TCP10L2B9ZVM9 353 aa23.67■■□□□ 1.38
HDDC3-202ENST00000394272 SLURP2P0DP57 97 aa23.67■■□□□ 1.38
HDDC3-202ENST00000394272 AKR1B1P15121 316 aa23.67■■□□□ 1.38
HDDC3-202ENST00000394272 NBPF9Q3BBW0 867 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms