RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PALM2Q8IXS6 379 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 NOC4LQ9BVI4 516 aaKnown RBP14.79□□□□□ -0.04
USP49-203ENST00000394253 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
USP49-203ENST00000394253 EIF3DO15371 548 aaKnown RBP eCLIP14.79□□□□□ -0.04
USP49-203ENST00000394253 NAPAP54920 295 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 POLE2P56282 527 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 LRRC8CQ8TDW0 803 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 SPZ1Q9BXG8 430 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 PROCA1Q8NCQ7 364 aaPredicted RBP14.78□□□□□ -0.04
USP49-203ENST00000394253 ZNF280CQ8ND82 737 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 PACSIN2Q9UNF0 486 aaPredicted RBP14.78□□□□□ -0.04
USP49-203ENST00000394253 THAP12O43422 761 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 TNFAIP3P21580 790 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 MAP3K10Q02779 954 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 ANKRD35Q8N283 1001 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 MARCKSP29966 332 aaPredicted RBP14.78□□□□□ -0.04
USP49-203ENST00000394253 TOM1L2Q6ZVM7 507 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 PRPF38AQ8NAV1 312 aaKnown RBP14.78□□□□□ -0.04
USP49-203ENST00000394253 RPSAP08865 295 aaKnown RBP14.78□□□□□ -0.04
USP49-203ENST00000394253 SYCE1LA8MT33 242 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 APOA1P02647 267 aa14.78□□□□□ -0.04
USP49-203ENST00000394253 KDM1AO60341 852 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 APBA1Q02410 837 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 NACA2Q9H009 215 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 CCDC169A6NNP5 214 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 RPS6KA1Q15418 735 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 CCDC197Q8NCU1 140 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 RUNDC3BQ96NL0 473 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 CLSTN2Q9H4D0 955 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 HDAC4P56524 1084 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 TRIML1Q8N9V2 468 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 CEP70Q8NHQ1 597 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 DHX58Q96C10 678 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 TRIM31Q9BZY9 425 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 DAPK1P53355 1430 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 KRT75O95678 551 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 F13A1P00488 732 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 IL9RQ01113 521 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 OGFOD1Q8N543 542 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 TRIM58Q8NG06 486 aa14.77□□□□□ -0.04
USP49-203ENST00000394253 DBNLQ9UJU6 430 aaKnown RBP14.77□□□□□ -0.04
USP49-203ENST00000394253 LIG3P49916 1009 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 ASPHQ12797 758 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 SNX1Q13596 522 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 BCAS4Q8TDM0 211 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 VPS37BQ9H9H4 285 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 TEKT1Q969V4 418 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 ERICH3Q5RHP9 1530 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 DTNBP1Q96EV8 351 aa14.77□□□□□ -0.05
USP49-203ENST00000394253 TSC1Q92574 1164 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 ECHDC1Q9NTX5 307 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 ARHGAP5Q13017 1502 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 LRPPRCP42704 1394 aaKnown RBP14.76□□□□□ -0.05
USP49-203ENST00000394253 FGFR1OP2Q9NVK5 253 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 POMGNT1Q8WZA1 660 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 SH3GL3Q99963 347 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 KRT82Q9NSB4 513 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 FBXO2Q9UK22 296 aaPredicted RBP14.76□□□□□ -0.05
USP49-203ENST00000394253 SAR1BQ9Y6B6 198 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 CAMSAP2Q08AD1 1489 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 GRIN1Q05586 938 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 BIRC3Q13489 604 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 ATP2B3Q16720 1220 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 CCDC84Q86UT8 332 aaPredicted RBP14.76□□□□□ -0.05
USP49-203ENST00000394253 CARD10Q9BWT7 1032 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 TAF11Q15544 211 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 C6orf118Q5T5N4 469 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 SAAL1Q96ER3 474 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 GARSP41250 739 aaKnown RBP14.76□□□□□ -0.05
USP49-203ENST00000394253 GNGT1P63211 74 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 IL1RL1Q01638 556 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 CDC5LQ99459 802 aaKnown RBP14.76□□□□□ -0.05
USP49-203ENST00000394253 JPH2Q9BR39 696 aaPredicted RBP14.76□□□□□ -0.05
USP49-203ENST00000394253 ATP6V0A4Q9HBG4 840 aa14.76□□□□□ -0.05
USP49-203ENST00000394253 LRRC8BQ6P9F7 803 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 GDAP1L1Q96MZ0 367 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 IFIH1Q9BYX4 1025 aaKnown RBP14.75□□□□□ -0.05
USP49-203ENST00000394253 UPF3AQ9H1J1 476 aaKnown RBP14.75□□□□□ -0.05
USP49-203ENST00000394253 HNRNPCP07910 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
USP49-203ENST00000394253 NECAB1Q8N987 351 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 TMX3Q96JJ7 454 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 PLCD1P51178 756 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 CTNND2Q9UQB3 1225 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 EIF3CLB5ME19 914 aaKnown RBP14.75□□□□□ -0.05
USP49-203ENST00000394253 SERPINB2P05120 415 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 ARHGDIAP52565 204 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 TBC1D8BQ0IIM8 1120 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 EIF3CQ99613 913 aaKnown RBP14.75□□□□□ -0.05
USP49-203ENST00000394253 EXOC7Q9UPT5 735 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 TTI1O43156 1089 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 S100BP04271 92 aaPredicted RBP14.75□□□□□ -0.05
USP49-203ENST00000394253 PDE6AP16499 860 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 SV2BQ7L1I2 683 aa14.75□□□□□ -0.05
USP49-203ENST00000394253 TRAF5O00463 557 aa14.74□□□□□ -0.05
USP49-203ENST00000394253 HDAC11Q96DB2 347 aa14.74□□□□□ -0.05
USP49-203ENST00000394253 TTLL3Q9Y4R7 772 aa14.74□□□□□ -0.05
USP49-203ENST00000394253 CCDC141Q6ZP82 1450 aa14.74□□□□□ -0.05
USP49-203ENST00000394253 EXOC5O00471 708 aa14.74□□□□□ -0.05
USP49-203ENST00000394253 TRPA1O75762 1119 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms