RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 TAF1CQ15572 869 aaPredicted RBP9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 GPAT2Q6NUI2 795 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 GADL1Q6ZQY3 521 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 CCDC129Q6ZRS4 1044 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 FOXP4Q8IVH2 680 aaPredicted RBP9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 STK11IPQ8N1F8 1099 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 APPBP2Q92624 585 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 STRBPQ96SI9 672 aaKnown RBP9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 SERPINB13Q9UIV8 391 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 ZBTB21Q9ULJ3 1066 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 SSUH2Q9Y2M2 353 aa9.23□□□□□ -0.93
HMGB3P1-201ENST00000393368 A0A0G2JLL6 359 aaPredicted RBP9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 USP17L21D6R901 530 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 PDHXO00330 501 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 GH2P01242 217 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 CYP2C8P10632 490 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 HMGCS2P54868 508 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 TREML2Q5T2D2 321 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 OTUD7BQ6GQQ9 843 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 TATDN1Q6P1N9 297 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 PRRT2Q7Z6L0 340 aaPredicted RBP9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 TTC6Q86TZ1 520 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 SKAP1Q86WV1 359 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 CFHR5Q9BXR6 569 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 MCOLN1Q9GZU1 580 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 EHD4Q9H223 541 aa9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 EPB41L4AQ9HCS5 686 aaPredicted RBP9.22□□□□□ -0.93
HMGB3P1-201ENST00000393368 USP17L5A8MUK1 530 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 GSG1L2A8MUP6 293 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 MPHOSPH10O00566 681 aaKnown RBP9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 CXCL11O14625 94 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 FKTNO75072 461 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 GABPAQ06546 454 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 MTMR2Q13614 643 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 RAB3GAP1Q15042 981 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 ZYXQ15942 572 aaKnown RBP9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 CERKLQ49MI3 558 aaPredicted RBP9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 ZMYM1Q5SVZ6 1142 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 CTR9Q6PD62 1173 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 ANKRD23Q86SG2 305 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 CLEC10AQ8IUN9 316 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 CD99L2Q8TCZ2 262 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 RILPL2Q969X0 211 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 EVI5LQ96CN4 794 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 FAM227BQ96M60 508 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 ZFYVE28Q9HCC9 887 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 ATP8A2Q9NTI2 1148 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 CPA4Q9UI42 421 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 MYH1P12882 1939 aa9.21□□□□□ -0.94
HMGB3P1-201ENST00000393368 PHIPQ8WWQ0 1821 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 ATAD5Q96QE3 1844 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 A0A0D9SFI3 127 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 MINDY4BA8MYZ0 360 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 FOXP2O15409 715 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 APPP05067 770 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 ASNSP08243 561 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 AKR1B1P15121 316 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 GUCY1A2P33402 732 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 TDO2P48775 406 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 NMIQ13287 307 aaPredicted RBP9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 SEPT2Q15019 361 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 ABCB5Q2M3G0 1257 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 C12orf60Q5U649 245 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 VPS53Q5VIR6 699 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 CTU1Q7Z7A3 348 aaKnown RBP9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 ACER1Q8TDN7 264 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 ABHD8Q96I13 439 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 ARHGAP39Q9C0H5 1083 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 MYH7P12883 1935 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 CASP8AP2Q9UKL3 1982 aa9.2□□□□□ -0.94
HMGB3P1-201ENST00000393368 HTTP42858 3142 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 TLR2O60603 784 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 PEX10O60683 326 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 GSPT1P15170 499 aaKnown RBP9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 CDK8P49336 464 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 SP3Q02447 781 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 FASTKD5Q7L8L6 764 aaKnown RBP9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 ZNF589Q86UQ0 364 aaPredicted RBP9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 IFNL3Q8IZI9 196 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 OSBPL3Q9H4L5 887 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 AS3MTQ9HBK9 375 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 ARPP21Q9UBL0 812 aaPredicted RBP9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 AGTPBP1Q9UPW5 1226 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 TRIM17Q9Y577 477 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 ADGRA2Q96PE1 1338 aa9.19□□□□□ -0.94
HMGB3P1-201ENST00000393368 ZSWIM8A7E2V4 1837 aa9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 PATL2C9JE40 543 aaKnown RBP9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 PITPNM1O00562 1244 aa9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 PRDM1O75626 825 aa9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 CTGFP29279 349 aa9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 BACE1P56817 501 aa9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 LRRFIP1Q32MZ4 808 aaKnown RBP9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 NOM1Q5C9Z4 860 aaKnown RBP9.18□□□□□ -0.94
HMGB3P1-201ENST00000393368 IFFO2Q5TF58 517 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms