RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 ACTN2P35609 894 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 TPM4P67936 248 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 CCDC191Q8NCU4 936 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 PIGBQ92521 554 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 LY9Q9HBG7 655 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 ARFGAP3Q9NP61 516 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 MYH6P13533 1939 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 MYO1BO43795 1136 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 GYPCP04921 128 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 RBL2Q08999 1139 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
PDCD4-202ENST00000393104 EYA2O00167 538 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDCD4-202ENST00000393104 SH3RF1Q7Z6J0 888 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 ZSWIM4Q9H7M6 989 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 ADD3Q9UEY8 706 aaKnown RBP13.06□□□□□ -0.32
PDCD4-202ENST00000393104 RSPH14Q9UHP6 348 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 RRP15Q9Y3B9 282 aaKnown RBP13.06□□□□□ -0.32
PDCD4-202ENST00000393104 COL24A1Q17RW2 1714 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 TCRBV5S4A2TA0A5A2 114 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 DDB1Q16531 1140 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 PANX2Q96RD6 677 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 CIAO1O76071 339 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 CASP1P29466 404 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 EARS2Q5JPH6 523 aaKnown RBP13.06□□□□□ -0.32
PDCD4-202ENST00000393104 NEUROD6Q96NK8 337 aa13.06□□□□□ -0.32
PDCD4-202ENST00000393104 TPM1P09493 284 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 ZAP70P43403 619 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 PDE4CQ08493 712 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 BRD3Q15059 726 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 ARGLU1Q9NWB6 273 aaPredicted RBP13.05□□□□□ -0.32
PDCD4-202ENST00000393104 FAN1Q9Y2M0 1017 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 CCP110O43303 1012 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
PDCD4-202ENST00000393104 PTPREP23469 700 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 ALG1Q9BT22 464 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
PDCD4-202ENST00000393104 MCAMP43121 646 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
PDCD4-202ENST00000393104 GOLGA1Q92805 767 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
PDCD4-202ENST00000393104 MTRQ99707 1265 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 MYH3P11055 1940 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
PDCD4-202ENST00000393104 CHMP4BP1P59074 171 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
PDCD4-202ENST00000393104 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
PDCD4-202ENST00000393104 PUF60Q9UHX1 559 aaKnown RBP13.04□□□□□ -0.32
PDCD4-202ENST00000393104 CDC23Q9UJX2 597 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 COL4A1P02462 1669 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 AGPSO00116 658 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 POSTNQ15063 836 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 XAGE2Q96GT9 111 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 RAI14Q9P0K7 980 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 LRP5O75197 1615 aa13.04□□□□□ -0.32
PDCD4-202ENST00000393104 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 GPAA1O43292 621 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 CBFA2T2O43439 604 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 CDC25AP30304 524 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 OXER1Q8TDS5 423 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 EPB41L4AQ9HCS5 686 aaPredicted RBP13.03□□□□□ -0.32
PDCD4-202ENST00000393104 DLEC1Q9Y238 1755 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 BTBD18B2RXH4 712 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 ADAMTS3O15072 1205 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 SGMS1Q86VZ5 419 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 ACRBPQ8NEB7 543 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 HSPA1LP34931 641 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 ANGEL1Q9UNK9 670 aaKnown RBP13.03□□□□□ -0.32
PDCD4-202ENST00000393104 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
PDCD4-202ENST00000393104 LMAN1P49257 510 aa13.02□□□□□ -0.32
PDCD4-202ENST00000393104 NCOA7Q8NI08 942 aa13.02□□□□□ -0.32
PDCD4-202ENST00000393104 SMARCC1Q92922 1105 aaPredicted RBP13.02□□□□□ -0.32
PDCD4-202ENST00000393104 RASSF4Q9H2L5 321 aa13.02□□□□□ -0.32
PDCD4-202ENST00000393104 TRIM10Q9UDY6 481 aa13.02□□□□□ -0.32
PDCD4-202ENST00000393104 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
PDCD4-202ENST00000393104 MFAP3LO75121 409 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 MYBL2P10244 700 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.33
PDCD4-202ENST00000393104 CASP8Q14790 479 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 NOM1Q5C9Z4 860 aaKnown RBP13.02□□□□□ -0.33
PDCD4-202ENST00000393104 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.33
PDCD4-202ENST00000393104 ANKRD65E5RJM6 399 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 AARSP49588 968 aaKnown RBP eCLIP13.02□□□□□ -0.33
PDCD4-202ENST00000393104 NPY5RQ15761 445 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 SLC35F6Q8N357 371 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms