RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ZMYM1Q5SVZ6 1142 aa21.37■■□□□ 1.01
CSPG5-202ENST00000383738 DIS3L2Q8IYB7 885 aaKnown RBP21.37■■□□□ 1.01
CSPG5-202ENST00000383738 NFIXQ14938 502 aa21.37■■□□□ 1.01
CSPG5-202ENST00000383738 C11orf57Q6ZUT1 292 aaPredicted RBP21.37■■□□□ 1.01
CSPG5-202ENST00000383738 KIAA1328Q86T90 577 aa21.37■■□□□ 1.01
CSPG5-202ENST00000383738 NUP88Q99567 741 aaPredicted RBP21.37■■□□□ 1.01
CSPG5-202ENST00000383738 CAVIN2O95810 425 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 CYP2E1P05181 493 aaPredicted RBP21.36■■□□□ 1.01
CSPG5-202ENST00000383738 ALDH1B1P30837 517 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 TERF2Q15554 542 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 LETM2Q2VYF4 491 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 LONRF3Q496Y0 759 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 DSCC1Q9BVC3 393 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 TCP11L1Q9NUJ3 509 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 COL15A1P39059 1388 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 TRIM75PA6NK02 468 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 UBE4AQ14139 1066 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 GPIHBP1Q8IV16 184 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 BTDP43251 543 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 CPXCR1Q8N123 301 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 CUL5Q93034 780 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 DESI2Q9BSY9 194 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 NARFQ9UHQ1 456 aa21.36■■□□□ 1.01
CSPG5-202ENST00000383738 PTF1AQ7RTS3 328 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 CAPZA3Q96KX2 299 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 VWA3AA6NCI4 1184 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 C21orf2O43822 256 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 PDE6BP35913 854 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 CCDC181Q5TID7 509 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 CTR9Q6PD62 1173 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 PIK3AP1Q6ZUJ8 805 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 MINPP1Q9UNW1 487 aa21.35■■□□□ 1.01
CSPG5-202ENST00000383738 CIAO1O76071 339 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 CCDC144BQ3MJ40 725 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 KMT5BQ4FZB7 885 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 DYNLL2Q96FJ2 89 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 ZSWIM6Q9HCJ5 1215 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 MST1RQ04912 1400 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 USP17L8P0C7I0 530 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 PDIA4P13667 645 aaKnown RBP21.34■■□□□ 1.01
CSPG5-202ENST00000383738 SMC1AQ14683 1233 aaKnown RBP21.34■■□□□ 1.01
CSPG5-202ENST00000383738 LRRC47Q8N1G4 583 aaKnown RBP21.34■■□□□ 1.01
CSPG5-202ENST00000383738 PLEKHA4Q9H4M7 779 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 MEGF6O75095 1541 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 TNKSO95271 1327 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 ZNF569Q5MCW4 686 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 IL25Q9H293 177 aa21.34■■□□□ 1.01
CSPG5-202ENST00000383738 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.34■■□□□ 1.01
CSPG5-202ENST00000383738 JCADQ9P266 1359 aa21.33■■□□□ 1.01
CSPG5-202ENST00000383738 EIF5P55010 431 aaKnown RBP21.33■■□□□ 1.01
CSPG5-202ENST00000383738 KRT40Q6A162 431 aa21.33■■□□□ 1.01
CSPG5-202ENST00000383738 CALM1P0DP23 149 aa21.33■■□□□ 1
CSPG5-202ENST00000383738 CALM2P0DP24 149 aa21.33■■□□□ 1
CSPG5-202ENST00000383738 CALM3P0DP25 149 aa21.33■■□□□ 1
CSPG5-202ENST00000383738 ZFYVE27Q5T4F4 411 aa21.33■■□□□ 1
CSPG5-202ENST00000383738 USH1GQ495M9 461 aa21.33■■□□□ 1
CSPG5-202ENST00000383738 AIFM3Q96NN9 605 aa21.33■■□□□ 1
CSPG5-202ENST00000383738 MAPK8IP1Q9UQF2 711 aa21.33■■□□□ 1
CSPG5-202ENST00000383738 ZNF654Q8IZM8 581 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 TMEM87BQ96K49 555 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 USP28Q96RU2 1077 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 ZBTB21Q9ULJ3 1066 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 PPEF1O14829 653 aaPredicted RBP21.32■■□□□ 1
CSPG5-202ENST00000383738 PARP1P09874 1014 aaKnown RBP21.32■■□□□ 1
CSPG5-202ENST00000383738 ERCC3P19447 782 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 MTX1Q13505 466 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 SSH2Q76I76 1423 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 ODF2Q5BJF6 829 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 HOMER2Q9NSB8 354 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 FER1L4A9Z1Z3 1794 aa21.32■■□□□ 1
CSPG5-202ENST00000383738 ADD2P35612 726 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 CDR1P51861 262 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 ADKP55263 362 aaKnown RBP21.31■■□□□ 1
CSPG5-202ENST00000383738 FANCCQ00597 558 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 FAM160A1Q05DH4 1040 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 DDX41Q9UJV9 622 aaKnown RBP21.31■■□□□ 1
CSPG5-202ENST00000383738 FRMPD2Q68DX3 1309 aaPredicted RBP21.31■■□□□ 1
CSPG5-202ENST00000383738 PSDA5PKW4 1024 aaPredicted RBP21.31■■□□□ 1
CSPG5-202ENST00000383738 DLGAP5Q15398 846 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 TMEM266Q2M3C6 531 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 ATG9AQ7Z3C6 839 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 NCAPD2Q15021 1401 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 SCRN1Q12765 414 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 TTC31Q49AM3 519 aaPredicted RBP21.31■■□□□ 1
CSPG5-202ENST00000383738 GOLGA1Q92805 767 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 KAZALD1Q96I82 304 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 CEMIPQ8WUJ3 1361 aa21.31■■□□□ 1
CSPG5-202ENST00000383738 SPICE1Q8N0Z3 855 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 TEKT1Q969V4 418 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 RRP36Q96EU6 259 aaKnown RBP21.3■■□□□ 1
CSPG5-202ENST00000383738 XDHP47989 1333 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 FAM196BA6NMK8 535 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 CCDC178Q5BJE1 867 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.3■■□□□ 1
CSPG5-202ENST00000383738 KCNG4Q8TDN1 519 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 PXDNQ92626 1479 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 WDHD1O75717 1129 aaPredicted RBP21.3■■□□□ 1
CSPG5-202ENST00000383738 CLEC17AQ6ZS10 378 aa21.3■■□□□ 1
CSPG5-202ENST00000383738 GNAQP50148 359 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms