RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 QRICH2Q9H0J4 1663 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 C8orf74Q6P047 294 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 IGSF22Q8N9C0 903 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 SSX2IPQ9Y2D8 614 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 MAP3K15Q6ZN16 1313 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 HPDP32754 393 aaPredicted RBP15.65■□□□□ 0.1
SNPH-201ENST00000381867 FMNL3Q8IVF7 1028 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 CACNA2D3Q8IZS8 1091 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 IMPACTQ9P2X3 320 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 ARHGAP25P42331 645 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 CLNS1AP54105 237 aaKnown RBP15.65■□□□□ 0.1
SNPH-201ENST00000381867 KIDINS220Q9ULH0 1771 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
SNPH-201ENST00000381867 PSMC4P43686 418 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 PLS1Q14651 629 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 SEL1L2Q5TEA6 688 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 CYP26C1Q6V0L0 522 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 TMC4Q7Z404 712 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 ZBTB38Q8NAP3 1195 aaPredicted RBP15.64■□□□□ 0.09
SNPH-201ENST00000381867 PSMD1Q99460 953 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 TNNQ9UQP3 1299 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 LRRIQ1Q96JM4 1722 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 LOC102724428A0A0B4J2F2 783 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 RIMBP2O15034 1052 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 PCK1P35558 622 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 PPP1R2P41236 205 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 SIK1P57059 783 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 APPBP2Q92624 585 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 XAGE2Q96GT9 111 aa15.64■□□□□ 0.09
SNPH-201ENST00000381867 RBM28Q9NW13 759 aaKnown RBP15.64■□□□□ 0.09
SNPH-201ENST00000381867 CTSWP56202 376 aa15.63■□□□□ 0.09
SNPH-201ENST00000381867 NLGN1Q8N2Q7 840 aa15.63■□□□□ 0.09
SNPH-201ENST00000381867 BUB1BO60566 1050 aaPredicted RBP15.63■□□□□ 0.09
SNPH-201ENST00000381867 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
SNPH-201ENST00000381867 HELBQ8NG08 1087 aaPredicted RBP15.63■□□□□ 0.09
SNPH-201ENST00000381867 KIAA1524Q8TCG1 905 aa15.63■□□□□ 0.09
SNPH-201ENST00000381867 IMPG2Q9BZV3 1241 aa15.63■□□□□ 0.09
SNPH-201ENST00000381867 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
SNPH-201ENST00000381867 MCM9Q9NXL9 1143 aa15.63■□□□□ 0.09
SNPH-201ENST00000381867 MKRN1Q9UHC7 482 aaKnown RBP15.63■□□□□ 0.09
SNPH-201ENST00000381867 FEZ2Q9UHY8 353 aaPredicted RBP15.63■□□□□ 0.09
SNPH-201ENST00000381867 HS2ST1Q7LGA3 356 aa15.63■□□□□ 0.09
SNPH-201ENST00000381867 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
SNPH-201ENST00000381867 CLGNO14967 610 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 GBP1P32455 592 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 CCT6AP40227 531 aaKnown RBP15.62■□□□□ 0.09
SNPH-201ENST00000381867 FANCCQ00597 558 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 DTHD1Q6ZMT9 781 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 CBX8Q9HC52 389 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 OAS2P29728 719 aaKnown RBP15.62■□□□□ 0.09
SNPH-201ENST00000381867 TPD52P55327 224 aaPredicted RBP15.62■□□□□ 0.09
SNPH-201ENST00000381867 IFT20Q8IY31 132 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 NAP1L4Q99733 375 aaKnown RBP15.62■□□□□ 0.09
SNPH-201ENST00000381867 RXRBP28702 533 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 MCM7P33993 719 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 CEP128Q6ZU80 1094 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 CHST3Q7LGC8 479 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 SMARCC2Q8TAQ2 1214 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 CTNND2Q9UQB3 1225 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 CFAP157Q5JU67 520 aa15.62■□□□□ 0.09
SNPH-201ENST00000381867 CPSF1Q10570 1443 aaKnown RBP15.61■□□□□ 0.09
SNPH-201ENST00000381867 C17orf53Q8N3J3 647 aaPredicted RBP15.61■□□□□ 0.09
SNPH-201ENST00000381867 GPR161Q8N6U8 529 aaKnown RBP15.61■□□□□ 0.09
SNPH-201ENST00000381867 MIPOL1Q8TD10 442 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 SSH3Q8TE77 659 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 TXNDC16Q9P2K2 825 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 DIP2AQ14689 1571 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 FAM13AO94988 1023 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 ARL1P40616 181 aaPredicted RBP15.61■□□□□ 0.09
SNPH-201ENST00000381867 NEDD9Q14511 834 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 FYB2Q5VWT5 728 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 GOLGA6BA6NDN3 693 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 VWA3BQ502W6 1294 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 TRMT2AQ8IZ69 625 aaKnown RBP15.61■□□□□ 0.09
SNPH-201ENST00000381867 NDC80O14777 642 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 ACTN4O43707 911 aaKnown RBP15.61■□□□□ 0.09
SNPH-201ENST00000381867 SARNPP82979 210 aaKnown RBP15.61■□□□□ 0.09
SNPH-201ENST00000381867 KBTBD3Q8NAB2 608 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 TMEM87BQ96K49 555 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
SNPH-201ENST00000381867 ARHGAP6O43182 974 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 TSNAXIP1Q2TAA8 658 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 RUFY4Q6ZNE9 571 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 CROCCP2Q86T23 111 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 NOC4LQ9BVI4 516 aaKnown RBP15.6■□□□□ 0.09
SNPH-201ENST00000381867 KIAA1210Q9ULL0 1709 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 RPS8P62241 208 aaKnown RBP15.6■□□□□ 0.09
SNPH-201ENST00000381867 CEP85LQ5SZL2 805 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 ERVV-1B6SEH8 477 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 BEND3Q5T5X7 828 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 TEX11Q8IYF3 940 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 RPS6KB1P23443 525 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 PPP2R5BQ15173 497 aa15.6■□□□□ 0.09
SNPH-201ENST00000381867 UTP14CQ5TAP6 766 aaKnown RBP15.6■□□□□ 0.09
SNPH-201ENST00000381867 RRP36Q96EU6 259 aaKnown RBP15.6■□□□□ 0.09
SNPH-201ENST00000381867 ATP5JP18859 108 aa15.59■□□□□ 0.09
SNPH-201ENST00000381867 ATP2B4P23634 1241 aa15.59■□□□□ 0.09
SNPH-201ENST00000381867 EIF6P56537 245 aaKnown RBP15.59■□□□□ 0.09
SNPH-201ENST00000381867 TBC1D8BQ0IIM8 1120 aa15.59■□□□□ 0.09
SNPH-201ENST00000381867 NCOA3Q9Y6Q9 1424 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms