RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SF3A1Q15459 793 aaKnown RBP16.47■□□□□ 0.23
CLCN4-201ENST00000380829 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
CLCN4-201ENST00000380829 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 POLR3EQ9NVU0 708 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
CLCN4-201ENST00000380829 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLCN4-201ENST00000380829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.47■□□□□ 0.23
CLCN4-201ENST00000380829 C6orf229H3BNL8 230 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 USP5P45974 858 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 TRIM22Q8IYM9 498 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 KIAA1524Q8TCG1 905 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
CLCN4-201ENST00000380829 KLRG2A4D1S0 409 aaPredicted RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 PLSCR1O15162 318 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 CTIFO43310 598 aaKnown RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 IRX5P78411 483 aaPredicted RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 CCDC73Q6ZRK6 1079 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 SPC24Q8NBT2 197 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 CRAMP1Q96RY5 1269 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 MRVI1Q9Y6F6 885 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 PPEF1O14829 653 aaPredicted RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 SPTLC2O15270 562 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 PCP11498 1178 aaKnown RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 UVSSAQ2YD98 709 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 ANO1Q5XXA6 986 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 RBM43Q6ZSC3 357 aaKnown RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 CRACR2BQ8N4Y2 399 aaPredicted RBP16.46■□□□□ 0.23
CLCN4-201ENST00000380829 KCNJ14Q9UNX9 436 aa16.46■□□□□ 0.23
CLCN4-201ENST00000380829 AP5Z1O43299 807 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 YEATS4O95619 227 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 GSTO1P78417 241 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 NAA30Q147X3 362 aaPredicted RBP16.45■□□□□ 0.22
CLCN4-201ENST00000380829 SBK1Q52WX2 424 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
CLCN4-201ENST00000380829 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 OGFRQ9NZT2 677 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 LAMB1P07942 1786 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 A0A1B0GVL5 298 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 ORC4O43929 436 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 SLC3A2P08195 630 aaKnown RBP16.45■□□□□ 0.22
CLCN4-201ENST00000380829 IL1R1P14778 569 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 RCAN1P53805 252 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 ADALQ6DHV7 355 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 RGS22Q8NE09 1264 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 KCNG4Q8TDN1 519 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 TGFBRAP1Q8WUH2 860 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 WASF1Q92558 559 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
CLCN4-201ENST00000380829 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
CLCN4-201ENST00000380829 FAM160A1Q05DH4 1040 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 PDE4BQ07343 736 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 ENGASEQ8NFI3 743 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 MRPS27Q92552 414 aaKnown RBP16.44■□□□□ 0.22
CLCN4-201ENST00000380829 DYNLL2Q96FJ2 89 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 FEZ1Q99689 392 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLCN4-201ENST00000380829 MROH7-TTC4A0A0A0MT08 1334 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 RIMBP2O15034 1052 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 DEXIO95424 95 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 BAG3O95817 575 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 MARCKSP29966 332 aaPredicted RBP16.44■□□□□ 0.22
CLCN4-201ENST00000380829 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
CLCN4-201ENST00000380829 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
CLCN4-201ENST00000380829 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
CLCN4-201ENST00000380829 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 TSPY2A6NKD2 308 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 BTBD18B2RXH4 712 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 KINO60870 393 aaKnown RBP16.43■□□□□ 0.22
CLCN4-201ENST00000380829 PLEKHA8P1O95397 391 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 MMP10P09238 476 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 GOLGB1Q14789 3259 aaKnown RBP16.43■□□□□ 0.22
CLCN4-201ENST00000380829 MMP1P03956 469 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 SLFN14P0C7P3 912 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 BTDP43251 543 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 TROAPQ12815 778 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 C12orf60Q5U649 245 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 MAPKAPK5Q8IW41 473 aa16.43■□□□□ 0.22
CLCN4-201ENST00000380829 LDHCP07864 332 aa16.42■□□□□ 0.22
CLCN4-201ENST00000380829 SRGNP10124 158 aa16.42■□□□□ 0.22
CLCN4-201ENST00000380829 NDUFA8P51970 172 aa16.42■□□□□ 0.22
CLCN4-201ENST00000380829 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
CLCN4-201ENST00000380829 DIS3L2Q8IYB7 885 aaKnown RBP16.42■□□□□ 0.22
CLCN4-201ENST00000380829 SAP30BPQ9UHR5 308 aaKnown RBP16.42■□□□□ 0.22
CLCN4-201ENST00000380829 A0A1W2PQ27 194 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 A0A1W2PQ64 194 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 A0A1W2PQD8 194 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 PPP4CP60510 307 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 LUZP1Q86V48 1076 aa16.41■□□□□ 0.22
CLCN4-201ENST00000380829 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms