RNA–Protein interactions for RNA: ENST00000379789.8

PFKFB3-205, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 1 (best) BASIC

Gene PFKFB3, Length 4,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-205ENST00000379789 CALM2P0DP24 149 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 CALM3P0DP25 149 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 IFNAR1P17181 557 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 RXRBP28702 533 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 KRT2P35908 639 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 CCDC186Q7Z3E2 898 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 PNMA1Q8ND90 353 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 GPKOWQ92917 476 aaPredicted RBP eCLIP12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 DHX58Q96C10 678 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 CPVLQ9H3G5 476 aa12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
PFKFB3-205ENST00000379789 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 SIPA1L3O60292 1781 aaPredicted RBP12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 PFKFB1P16118 471 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 ADRA2BP18089 450 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 PPP1R9BQ96SB3 815 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 GOLPH3LQ9H4A5 285 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 H0YIN7 160 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 YEATS4O95619 227 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 STAMQ92783 540 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 MXD3Q9BW11 206 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 PRDM10Q9NQV6 1147 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 VWA3AA6NCI4 1184 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 C2CD5Q86YS7 1000 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 EYA3Q99504 573 aa12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 RIOK1Q9BRS2 568 aaKnown RBP12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.88□□□□□ -0.35
PFKFB3-205ENST00000379789 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.88□□□□□ -0.353e-6■□□□□ 8.4
PFKFB3-205ENST00000379789 SLIT2O94813 1529 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 POLR2DO15514 142 aaKnown RBP12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 FMNL1O95466 1100 aaPredicted RBP12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 PLCG2P16885 1265 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 PLIN2Q99541 437 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 ZKSCAN5Q9Y2L8 839 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 CACNB3P54284 484 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 RBM6P78332 1123 aaKnown RBP12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 CFAP100Q494V2 611 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
PFKFB3-205ENST00000379789 PTGS1P23219 599 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 RASGRP4Q8TDF6 673 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 ALDH1B1P30837 517 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 TXLNAP40222 546 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 NAPAP54920 295 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 GRIK5Q16478 980 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 UBA5Q9GZZ9 404 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 TBC1D16Q8TBP0 767 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 UIMC1Q96RL1 719 aa12.86□□□□□ -0.35
PFKFB3-205ENST00000379789 PDE6BP35913 854 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 PNOCQ13519 176 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 PCDHB6Q9Y5E3 794 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 STK32BQ9NY57 414 aa12.85□□□□□ -0.35
PFKFB3-205ENST00000379789 MMP1P03956 469 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 PLCD1P51178 756 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 DDR1Q08345 913 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 HSP90AA2PQ14568 343 aaPredicted RBP12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 COL23A1Q86Y22 540 aaPredicted RBP12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 POLLQ9UGP5 575 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 FRMPD2Q68DX3 1309 aaPredicted RBP12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 CHRNA5P30532 468 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 KIAA1468Q9P260 1216 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 PARP1P09874 1014 aaKnown RBP12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 GNAQP50148 359 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
PFKFB3-205ENST00000379789 WDR19Q8NEZ3 1342 aa12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 FAM196BA6NMK8 535 aa12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 SMTNL1A8MU46 457 aa12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 STX17P56962 302 aa12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 KLRF2D3W0D1 207 aa12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 TDRD7Q8NHU6 1098 aaKnown RBP12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 RNF26Q9BY78 433 aaPredicted RBP12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 TRMT1Q9NXH9 659 aaKnown RBP12.83□□□□□ -0.36
PFKFB3-205ENST00000379789 TMOD2Q9NZR1 351 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms