RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 RCAN1P53805 252 aa20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 ARFGEF1Q9Y6D6 1849 aa20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 H3BQV1 296 aa20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 NFKBIEO00221 500 aa20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 CDKL5O76039 1030 aa20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 CDK8P49336 464 aa20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 IFFO2Q5TF58 517 aa20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 CPLX2Q6PUV4 134 aaKnown RBP20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 ZNF444Q8N0Y2 327 aaPredicted RBP20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 OSBPL5Q9H0X9 879 aaPredicted RBP20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 ORC3Q9UBD5 711 aaPredicted RBP20.48■□□□□ 0.87
LYSMD4-203ENST00000378904 FSD2A1L4K1 749 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 TRAK2O60296 914 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 RASA1P20936 1047 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 NFIAQ12857 509 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 NTRK3Q16288 839 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 TTC6Q86TZ1 520 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 FERMT3Q86UX7 667 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 NUP133Q8WUM0 1156 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 RRAGDQ9NQL2 400 aaPredicted RBP20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 RTN1Q16799 776 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 NLGN2Q8NFZ4 835 aa20.47■□□□□ 0.87
LYSMD4-203ENST00000378904 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
LYSMD4-203ENST00000378904 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
LYSMD4-203ENST00000378904 FOSBP53539 338 aa20.46■□□□□ 0.87
LYSMD4-203ENST00000378904 CFAP100Q494V2 611 aa20.46■□□□□ 0.87
LYSMD4-203ENST00000378904 GMLQ99445 158 aa20.46■□□□□ 0.87
LYSMD4-203ENST00000378904 LMBRD1Q9NUN5 540 aa20.46■□□□□ 0.87
LYSMD4-203ENST00000378904 CATIPQ7Z7H3 387 aa20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 FANCBQ8NB91 859 aa20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 IL17RBQ9NRM6 502 aa20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 PRPF40AO75400 957 aaKnown RBP20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 CACNB3P54284 484 aa20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 PHKBQ93100 1093 aa20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 IDI2Q9BXS1 227 aa20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 SPON1Q9HCB6 807 aa20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 ZBTB12Q9Y330 459 aaPredicted RBP20.45■□□□□ 0.86
LYSMD4-203ENST00000378904 CCDC196A0A1B0GTZ2 297 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 GABPAQ06546 454 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 RCSD1Q6JBY9 416 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 TCP11L1Q9NUJ3 509 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 CXCL9Q07325 125 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 TROAPQ12815 778 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 DGKHQ86XP1 1220 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 TDRD3Q9H7E2 651 aaKnown RBP20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 HDAC9Q9UKV0 1011 aa20.44■□□□□ 0.86
LYSMD4-203ENST00000378904 MYH15Q9Y2K3 1946 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 MYH6P13533 1939 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 DDAH1O94760 285 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 CALM1P0DP23 149 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 CALM2P0DP24 149 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 CALM3P0DP25 149 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 IFNAR1P17181 557 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 PPP2R5BQ15173 497 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 ZFPM1Q8IX07 1006 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 PRMT6Q96LA8 375 aaPredicted RBP20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 FAM198AQ9UFP1 575 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 CNPY2Q9Y2B0 182 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 SIPA1L1O43166 1804 aa20.43■□□□□ 0.86
LYSMD4-203ENST00000378904 DNM1Q05193 864 aaKnown RBP20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 SKOR2Q2VWA4 1001 aaPredicted RBP20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 AGBL3Q8NEM8 1001 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 C8orf76Q96K31 380 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 GDPD2Q9HCC8 539 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 SERPINB13Q9UIV8 391 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 STK36Q9NRP7 1315 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 LTBP3Q9NS15 1303 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 NPM3O75607 178 aaKnown RBP20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 HLA-DOAP06340 250 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 XRCC6P12956 609 aaKnown RBP eCLIP20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 GUCY1B3Q02153 619 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 TCP10Q12799 353 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 RESTQ13127 1097 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 OGFOD1Q8N543 542 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 NEDD1Q8NHV4 660 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 ANKS1AQ92625 1134 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 SLC26A6Q9BXS9 759 aa20.42■□□□□ 0.86
LYSMD4-203ENST00000378904 FMNL1O95466 1100 aaPredicted RBP20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 CIAPIN1Q6FI81 312 aa20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 ZSCAN16Q9H4T2 348 aaPredicted RBP20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 NCLP19338 710 aaKnown RBP20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 RASSF7Q02833 373 aa20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 FAM173BQ6P4H8 233 aa20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 DHX36Q9H2U1 1008 aaKnown RBP20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 KAT14Q9H8E8 782 aa20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 SWAP70Q9UH65 585 aa20.41■□□□□ 0.86
LYSMD4-203ENST00000378904 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 OTUD7BQ6GQQ9 843 aa20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 NBPF11Q86T75 865 aa20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 CMTR1Q8N1G2 835 aaKnown RBP20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 FBXO18Q8NFZ0 1043 aa20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 ALG1Q9BT22 464 aa20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 RBM28Q9NW13 759 aaKnown RBP20.4■□□□□ 0.86
LYSMD4-203ENST00000378904 DLGAP5Q15398 846 aa20.39■□□□□ 0.86
LYSMD4-203ENST00000378904 USP48Q86UV5 1035 aa20.39■□□□□ 0.86
LYSMD4-203ENST00000378904 CCDC82Q8N4S0 544 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms