RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PDE6AP16499 860 aa22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 HOXA7P31268 230 aaPredicted RBP22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 GRK4P32298 578 aa22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 GCLCP48506 637 aaPredicted RBP22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 PRKCZQ05513 592 aa22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 PABPC4Q13310 644 aaKnown RBP eCLIP22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 FAM110CQ1W6H9 321 aa22.95■■□□□ 1.26
TMEM88B-201ENST00000378821 ATP5JP18859 108 aa22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 USP5P45974 858 aa22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 SHROOM1Q2M3G4 852 aaPredicted RBP22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 SLC9C2Q5TAH2 1124 aa22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 RAET1EQ8TD07 263 aa22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 ASCC2Q9H1I8 757 aaPredicted RBP22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 ZBTB21Q9ULJ3 1066 aa22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 GABRQQ9UN88 632 aa22.94■■□□□ 1.26
TMEM88B-201ENST00000378821 IRF5Q13568 498 aa22.93■■□□□ 1.26
TMEM88B-201ENST00000378821 MTMR2Q13614 643 aa22.93■■□□□ 1.26
TMEM88B-201ENST00000378821 TTC6Q86TZ1 520 aa22.93■■□□□ 1.26
TMEM88B-201ENST00000378821 ANKRD13CQ8N6S4 541 aa22.93■■□□□ 1.26
TMEM88B-201ENST00000378821 TRIM34Q9BYJ4 488 aa22.93■■□□□ 1.26
TMEM88B-201ENST00000378821 SERPINB13Q9UIV8 391 aa22.93■■□□□ 1.26
TMEM88B-201ENST00000378821 MAGEB6P1A0A0J9YX57 407 aa22.92■■□□□ 1.26
TMEM88B-201ENST00000378821 USP17L10C9JJH3 530 aa22.92■■□□□ 1.26
TMEM88B-201ENST00000378821 ECM2O94769 699 aaPredicted RBP22.92■■□□□ 1.26
TMEM88B-201ENST00000378821 SLC4A8Q2Y0W8 1093 aa22.92■■□□□ 1.26
TMEM88B-201ENST00000378821 SLAIN1Q8ND83 568 aa22.92■■□□□ 1.26
TMEM88B-201ENST00000378821 PXYLP1Q8TE99 480 aa22.92■■□□□ 1.26
TMEM88B-201ENST00000378821 DOCK3Q8IZD9 2030 aa22.92■■□□□ 1.26
TMEM88B-201ENST00000378821 ZNF532Q9HCE3 1301 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 GOLIM4O00461 696 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 GDF11O95390 407 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 GABPAQ06546 454 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 MTFR1Q15390 333 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 HAUS7Q99871 368 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 DCTPP1Q9H773 170 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 MORF4L1Q9UBU8 362 aa22.91■■□□□ 1.26
TMEM88B-201ENST00000378821 NAV1Q8NEY1 1877 aa22.9■■□□□ 1.26
TMEM88B-201ENST00000378821 SLC34A2O95436 690 aa22.9■■□□□ 1.26
TMEM88B-201ENST00000378821 FLT3LGP49771 235 aa22.9■■□□□ 1.26
TMEM88B-201ENST00000378821 PLCD1P51178 756 aa22.9■■□□□ 1.26
TMEM88B-201ENST00000378821 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
TMEM88B-201ENST00000378821 PAG1Q9NWQ8 432 aa22.9■■□□□ 1.26
TMEM88B-201ENST00000378821 MYH7P12883 1935 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 TNPO2O14787 897 aaKnown RBP22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 SMARCA5O60264 1052 aaPredicted RBP22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 GH2P01242 217 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 SHMT1P34896 483 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 EXOC6Q8TAG9 804 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 EDC3Q96F86 508 aaKnown RBP22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 C12orf42Q96LP6 360 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 DNAJC2Q99543 621 aaKnown RBP22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 CRNKL1Q9BZJ0 848 aaKnown RBP22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 LRRCC1Q9C099 1032 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 EMILIN3Q9NT22 766 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 TMOD4Q9NZQ9 345 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 TAOK2Q9UL54 1235 aa22.89■■□□□ 1.25
TMEM88B-201ENST00000378821 GJB1P08034 283 aa22.88■■□□□ 1.25
TMEM88B-201ENST00000378821 ADD2P35612 726 aa22.88■■□□□ 1.25
TMEM88B-201ENST00000378821 BOLA2Q9H3K6 86 aa22.88■■□□□ 1.25
TMEM88B-201ENST00000378821 ADCY3O60266 1144 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 MYCP01106 439 aaPredicted RBP22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 CCL5P13501 91 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 GJA8P48165 433 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 CERKLQ49MI3 558 aaPredicted RBP22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 USP17L2Q6R6M4 530 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 NKX2-3Q8TAU0 364 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 COA7Q96BR5 231 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 SHISA4Q96DD7 197 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 P2RX7Q99572 595 aaKnown RBP22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 DCP1AQ9NPI6 582 aaPredicted RBP22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 GJD2Q9UKL4 321 aa22.87■■□□□ 1.25
TMEM88B-201ENST00000378821 UBXN2AP68543 259 aa22.86■■□□□ 1.25
TMEM88B-201ENST00000378821 UBE2Q1Q7Z7E8 422 aa22.86■■□□□ 1.25
TMEM88B-201ENST00000378821 LCORLQ8N3X6 602 aa22.86■■□□□ 1.25
TMEM88B-201ENST00000378821 PLXNB2O15031 1838 aa22.86■■□□□ 1.25
TMEM88B-201ENST00000378821 GUCY1A2P33402 732 aa22.85■■□□□ 1.25
TMEM88B-201ENST00000378821 HERVK_113P62684 666 aa22.85■■□□□ 1.25
TMEM88B-201ENST00000378821 IRX3P78415 501 aaPredicted RBP22.85■■□□□ 1.25
TMEM88B-201ENST00000378821 AAMPQ13685 434 aa22.85■■□□□ 1.25
TMEM88B-201ENST00000378821 UBE3CQ15386 1083 aa22.85■■□□□ 1.25
TMEM88B-201ENST00000378821 ABCB5Q2M3G0 1257 aa22.85■■□□□ 1.25
TMEM88B-201ENST00000378821 KIAA1683Q9H0B3 1180 aa22.85■■□□□ 1.25
TMEM88B-201ENST00000378821 POLR3DP05423 398 aaPredicted RBP22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 CAPN2P17655 700 aa22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 POTEEQ6S8J3 1075 aa22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 GTF3C2Q8WUA4 911 aaPredicted RBP22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 ATP8A2Q9NTI2 1148 aa22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 MCM9Q9NXL9 1143 aa22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 RBPJLQ9UBG7 517 aa22.84■■□□□ 1.25
TMEM88B-201ENST00000378821 ELNP15502 786 aa22.83■■□□□ 1.25
TMEM88B-201ENST00000378821 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.25
TMEM88B-201ENST00000378821 SDR42E1Q8WUS8 393 aa22.83■■□□□ 1.25
TMEM88B-201ENST00000378821 RNF208Q9H0X6 261 aa22.83■■□□□ 1.25
TMEM88B-201ENST00000378821 TXNRD2Q9NNW7 524 aa22.83■■□□□ 1.25
TMEM88B-201ENST00000378821 BIN2Q9UBW5 565 aaPredicted RBP22.83■■□□□ 1.25
TMEM88B-201ENST00000378821 USP14P54578 494 aa22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 EVX2Q03828 476 aa22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 HDAC1Q13547 482 aaPredicted RBP22.82■■□□□ 1.24
TMEM88B-201ENST00000378821 SLFNL1Q499Z3 407 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms