RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 WHAMMQ8TF30 809 aa18.15■□□□□ 0.5
RGP1-201ENST00000378078 STK38LQ9Y2H1 464 aa18.15■□□□□ 0.5
RGP1-201ENST00000378078 SLC12A2P55011 1212 aa18.15■□□□□ 0.5
RGP1-201ENST00000378078 SMYD2Q9NRG4 433 aa18.15■□□□□ 0.5
RGP1-201ENST00000378078 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
RGP1-201ENST00000378078 CTTNBP2NLQ9P2B4 639 aa18.15■□□□□ 0.5
RGP1-201ENST00000378078 ARID4AP29374 1257 aaPredicted RBP18.15■□□□□ 0.5
RGP1-201ENST00000378078 CCDC26Q8TAB7 109 aa18.15■□□□□ 0.5
RGP1-201ENST00000378078 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
RGP1-201ENST00000378078 PRPF38AQ8NAV1 312 aaKnown RBP18.14■□□□□ 0.5
RGP1-201ENST00000378078 VPS37BQ9H9H4 285 aa18.14■□□□□ 0.5
RGP1-201ENST00000378078 TNNC1P63316 161 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 RPS6KA2Q15349 733 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 ANKRD42Q8N9B4 389 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 SLC1A4P43007 532 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 CALCRLQ16602 461 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 RUFY3Q7L099 469 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 KRT222Q8N1A0 295 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 DENND2AQ9ULE3 1009 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 CC2D2AQ9P2K1 1620 aa18.14■□□□□ 0.49
RGP1-201ENST00000378078 SUGCTQ9HAC7 445 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 NOC2LQ9Y3T9 749 aaKnown RBP18.13■□□□□ 0.49
RGP1-201ENST00000378078 TBC1D8BQ0IIM8 1120 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 THRAP3Q9Y2W1 955 aaKnown RBP18.13■□□□□ 0.49
RGP1-201ENST00000378078 HP1BP3Q5SSJ5 553 aaPredicted RBP18.13■□□□□ 0.49
RGP1-201ENST00000378078 PCK1P35558 622 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 NME8Q8N427 588 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 PALM3A6NDB9 673 aaPredicted RBP18.13■□□□□ 0.49
RGP1-201ENST00000378078 AKR1B15C9JRZ8 316 aaPredicted RBP18.13■□□□□ 0.49
RGP1-201ENST00000378078 COBLO75128 1261 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 VPS41P49754 854 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 GDAP1L1Q96MZ0 367 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 KCNJ14Q9UNX9 436 aa18.13■□□□□ 0.49
RGP1-201ENST00000378078 KIF3CO14782 793 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 BNIP3LO60238 219 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 PRIM1P49642 420 aaKnown RBP18.12■□□□□ 0.49
RGP1-201ENST00000378078 ERCC6LQ2NKX8 1250 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 ACRBPQ8NEB7 543 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 SNX29Q8TEQ0 813 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 BUB1BO60566 1050 aaPredicted RBP18.12■□□□□ 0.49
RGP1-201ENST00000378078 PPP2R3AQ06190 1150 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 BRD3Q15059 726 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 FAM76AQ8TAV0 307 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 CDCA7Q9BWT1 371 aaPredicted RBP18.12■□□□□ 0.49
RGP1-201ENST00000378078 VAV2P52735 878 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 HHATQ5VTY9 493 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 UBL4BQ8N7F7 174 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 EXOC3O60645 756 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 BAG1Q99933 345 aaPredicted RBP18.12■□□□□ 0.49
RGP1-201ENST00000378078 CSADQ9Y600 493 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 ABCB4P21439 1286 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 ALKBH8Q96BT7 664 aaKnown RBP18.12■□□□□ 0.49
RGP1-201ENST00000378078 KIF14Q15058 1648 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 CASQ2O14958 399 aaPredicted RBP18.12■□□□□ 0.49
RGP1-201ENST00000378078 GSTA1P08263 222 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 GSTA2P09210 222 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 RSAD2Q8WXG1 361 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 TRIM56Q9BRZ2 755 aaKnown RBP18.12■□□□□ 0.49
RGP1-201ENST00000378078 NBPF3Q9H094 633 aa18.12■□□□□ 0.49
RGP1-201ENST00000378078 ALAS1P13196 640 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 LACTBP83111 547 aaPredicted RBP18.11■□□□□ 0.49
RGP1-201ENST00000378078 CTAGE3PQ8IX95 158 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 FIS1Q9Y3D6 152 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
RGP1-201ENST00000378078 TTC31Q49AM3 519 aaPredicted RBP18.11■□□□□ 0.49
RGP1-201ENST00000378078 KRBA2Q6ZNG9 492 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 AFAP1L2Q8N4X5 818 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 PRDM5Q9NQX1 630 aaPredicted RBP18.11■□□□□ 0.49
RGP1-201ENST00000378078 EXOC7Q9UPT5 735 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 H7C1D1 291 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 CEP104O60308 925 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 SPC25Q9HBM1 224 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 SFMBT1Q9UHJ3 866 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 NBPF11Q86T75 865 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
RGP1-201ENST00000378078 KRT15P19012 456 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 CCDC105Q8IYK2 499 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 IGSF22Q8N9C0 903 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 TRIM35Q9UPQ4 493 aa18.11■□□□□ 0.49
RGP1-201ENST00000378078 UBXN2AP68543 259 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 CETN3O15182 167 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 GTF2IP78347 998 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
RGP1-201ENST00000378078 GANCQ8TET4 914 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 TAB2Q9NYJ8 693 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 SPAG1Q07617 926 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 HERC4Q5GLZ8 1057 aaPredicted RBP18.1■□□□□ 0.49
RGP1-201ENST00000378078 TRIM50Q86XT4 487 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 CSGALNACT2Q8N6G5 542 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 IQUBQ8NA54 791 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 MCUR1Q96AQ8 359 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 CSRNP2Q9H175 543 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 PCDHB13Q9Y5F0 798 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 NPHP3Q7Z494 1330 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 DISP3Q9P2K9 1392 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 CNNM4Q6P4Q7 775 aa18.1■□□□□ 0.49
RGP1-201ENST00000378078 NUCKS1Q9H1E3 243 aaKnown RBP18.1■□□□□ 0.49
RGP1-201ENST00000378078 MRPL46Q9H2W6 279 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms