RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 DDAH1O94760 285 aa21.72■■□□□ 1.07
PPP1R3F-202ENST00000376188 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
PPP1R3F-202ENST00000376188 C17orf53Q8N3J3 647 aaPredicted RBP21.72■■□□□ 1.07
PPP1R3F-202ENST00000376188 GRAPQ13588 217 aa21.71■■□□□ 1.07
PPP1R3F-202ENST00000376188 SBK1Q52WX2 424 aa21.71■■□□□ 1.07
PPP1R3F-202ENST00000376188 GRAPLQ8TC17 118 aaPredicted RBP21.71■■□□□ 1.07
PPP1R3F-202ENST00000376188 GJD4Q96KN9 370 aaPredicted RBP21.71■■□□□ 1.07
PPP1R3F-202ENST00000376188 LEMD3Q9Y2U8 911 aa21.71■■□□□ 1.07
PPP1R3F-202ENST00000376188 NRBP1Q9UHY1 535 aa21.71■■□□□ 1.07
PPP1R3F-202ENST00000376188 TUBE1Q9UJT0 475 aa21.71■■□□□ 1.07
PPP1R3F-202ENST00000376188 PRPF3O43395 683 aaKnown RBP21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 PRDM1O75626 825 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 ADRA2BP18089 450 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 NT5C2P49902 561 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 TOB1P50616 345 aaPredicted RBP21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 DZIP1Q86YF9 867 aaKnown RBP21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 CNBD1Q8NA66 436 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 CEP131Q9UPN4 1083 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 TPM4P67936 248 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 TROAPQ12815 778 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 TXNRD3Q86VQ6 643 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 FBXW7Q969H0 707 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 PRIMPOLQ96LW4 560 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 CLIC6Q96NY7 704 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 ANKIB1Q9P2G1 1089 aa21.7■■□□□ 1.06
PPP1R3F-202ENST00000376188 UQCRHLA0A096LP55 91 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 UQCRHP07919 91 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 NFIXQ14938 502 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 ELOA2Q8IYF1 753 aaPredicted RBP21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 WDR66Q8TBY9 1149 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 KCNH3Q9ULD8 1083 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 SMTNL1A8MU46 457 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 NEMFO60524 1076 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 PDE4BQ07343 736 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 FUT2Q10981 343 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 FAM196AQ6ZSG2 479 aa21.69■■□□□ 1.06
PPP1R3F-202ENST00000376188 XDHP47989 1333 aa21.68■■□□□ 1.06
PPP1R3F-202ENST00000376188 PTPREP23469 700 aa21.68■■□□□ 1.06
PPP1R3F-202ENST00000376188 BIN1O00499 593 aa21.68■■□□□ 1.06
PPP1R3F-202ENST00000376188 NR5A1Q13285 461 aa21.68■■□□□ 1.06
PPP1R3F-202ENST00000376188 FAM13BQ9NYF5 915 aa21.68■■□□□ 1.06
PPP1R3F-202ENST00000376188 MORC2Q9Y6X9 1032 aaPredicted RBP21.68■■□□□ 1.06
PPP1R3F-202ENST00000376188 PKN1Q16512 942 aa21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 KRBA2Q6ZNG9 492 aa21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 ZNF579Q8NAF0 562 aaKnown RBP21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 HOOK1Q9UJC3 728 aaKnown RBP21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 CCDC144BQ3MJ40 725 aa21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 TMTC3Q6ZXV5 915 aa21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 CNNM3Q8NE01 707 aa21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 CTCFLQ8NI51 663 aaPredicted RBP21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 NOL10Q9BSC4 688 aaKnown RBP21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 FBXO2Q9UK22 296 aaPredicted RBP21.67■■□□□ 1.06
PPP1R3F-202ENST00000376188 IKBKBO14920 756 aa21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 LDHBP07195 334 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 KRT2P35908 639 aa21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 LRMPQ12912 555 aa21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 MEX3CQ5U5Q3 659 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 PHF20Q9BVI0 1012 aa21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 C15orf52Q6ZUT6 534 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 ZNF804AQ7Z570 1209 aa21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 OXER1Q8TDS5 423 aa21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 CACTINQ8WUQ7 758 aaKnown RBP21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 BRMS1Q9HCU9 246 aa21.66■■□□□ 1.06
PPP1R3F-202ENST00000376188 NAV1Q8NEY1 1877 aa21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 ONECUT3O60422 494 aaPredicted RBP21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 PLEKHA8P1O95397 391 aa21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 GSTO1P78417 241 aa21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 VPS54Q9P1Q0 977 aa21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 PCDHB6Q9Y5E3 794 aa21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 METTL16Q86W50 562 aaKnown RBP21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 BCL11BQ9C0K0 894 aaPredicted RBP21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 CABP5Q9NP86 173 aa21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 MCM9Q9NXL9 1143 aa21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 SRPRBQ9Y5M8 271 aaKnown RBP21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 V9GY48 417 aaPredicted RBP21.65■■□□□ 1.06
PPP1R3F-202ENST00000376188 DYNC1I1O14576 645 aa21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 PNOCQ13519 176 aa21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 LONRF3Q496Y0 759 aa21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 LRRC8AQ8IWT6 810 aa21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 JAG2Q9Y219 1238 aa21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 CNTNAP5Q8WYK1 1306 aa21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 TSPY2A6NKD2 308 aa21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.05
PPP1R3F-202ENST00000376188 BMP15O95972 392 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 CYP2D6P10635 497 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 NCAPHQ15003 741 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 PRR5LQ6MZQ0 368 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 MYRIPQ8NFW9 859 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 CERKQ8TCT0 537 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 IMPACTQ9P2X3 320 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 TRIM75PA6NK02 468 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 BAG3O95817 575 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 GSDMDP57764 484 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 FAM47AQ5JRC9 791 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 SHISA4Q96DD7 197 aa21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 MKRN1Q9UHC7 482 aaKnown RBP21.63■■□□□ 1.05
PPP1R3F-202ENST00000376188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.62■■□□□ 1.05
PPP1R3F-202ENST00000376188 EVX2Q03828 476 aa21.62■■□□□ 1.05
PPP1R3F-202ENST00000376188 OLFM4Q6UX06 510 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms