RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CTR9Q6PD62 1173 aa9.47□□□□□ -0.89
UBR4-202ENST00000375224 ZBTB9Q96C00 473 aa9.47□□□□□ -0.89
UBR4-202ENST00000375224 ZKSCAN3Q9BRR0 538 aa9.47□□□□□ -0.89
UBR4-202ENST00000375224 MYL10Q9BUA6 226 aa9.47□□□□□ -0.89
UBR4-202ENST00000375224 GEMIN8Q9NWZ8 242 aaKnown RBP9.47□□□□□ -0.89
UBR4-202ENST00000375224 IRS2Q9Y4H2 1338 aa9.47□□□□□ -0.89
UBR4-202ENST00000375224 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 KIF28PB7ZC32 967 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.89
UBR4-202ENST00000375224 BBOX1O75936 387 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 BAG3O95817 575 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 SERPINB2P05120 415 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.89
UBR4-202ENST00000375224 TMC4Q7Z404 712 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 AMOTL1Q8IY63 956 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 CRACR2BQ8N4Y2 399 aaPredicted RBP9.46□□□□□ -0.89
UBR4-202ENST00000375224 TDRD7Q8NHU6 1098 aaKnown RBP9.46□□□□□ -0.89
UBR4-202ENST00000375224 RNF26Q9BY78 433 aaPredicted RBP9.46□□□□□ -0.89
UBR4-202ENST00000375224 ANO10Q9NW15 660 aa9.46□□□□□ -0.89
UBR4-202ENST00000375224 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 USP17L21D6R901 530 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 ZNF500O60304 480 aaPredicted RBP9.46□□□□□ -0.9
UBR4-202ENST00000375224 GYS1P13807 737 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 CMA1P23946 247 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 CRY2Q49AN0 593 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 KRT27Q7Z3Y8 459 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 ZNF384Q8TF68 577 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 NUP133Q8WUM0 1156 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBR4-202ENST00000375224 GOLPH3LQ9H4A5 285 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 DCP1AQ9NPI6 582 aaPredicted RBP9.46□□□□□ -0.9
UBR4-202ENST00000375224 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBR4-202ENST00000375224 BAZ2AQ9UIF9 1905 aaKnown RBP9.46□□□□□ -0.9
UBR4-202ENST00000375224 SPDYE4A6NLX3 237 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 DDAH1O94760 285 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 ZNF165P49910 485 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 ZRSR1Q15695 479 aaKnown RBP9.46□□□□□ -0.9
UBR4-202ENST00000375224 CCDC178Q5BJE1 867 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 FMR1NBQ8N0W7 255 aaPredicted RBP9.46□□□□□ -0.9
UBR4-202ENST00000375224 SDF4Q9BRK5 362 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 NAT10Q9H0A0 1025 aaKnown RBP9.46□□□□□ -0.9
UBR4-202ENST00000375224 FOXP1Q9H334 677 aaPredicted RBP9.46□□□□□ -0.9
UBR4-202ENST00000375224 YY1AP1Q9H869 796 aa9.46□□□□□ -0.9
UBR4-202ENST00000375224 ECM29Q5VYK3 1845 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.45□□□□□ -0.9
UBR4-202ENST00000375224 MMP1P03956 469 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 PRDX5P30044 214 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 PLCB2Q00722 1185 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 STK11IPQ8N1F8 1099 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 CBX8Q9HC52 389 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 CALCOCO1Q9P1Z2 691 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
UBR4-202ENST00000375224 LAMB1P07942 1786 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 MYH2Q9UKX2 1941 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 KIAA2012Q0VF49 1180 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 AIFM3Q96NN9 605 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 GJB4Q9NTQ9 266 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 GGA1Q9UJY5 639 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 DLEC1Q9Y238 1755 aa9.45□□□□□ -0.9
UBR4-202ENST00000375224 GOLGA6L19H0YKK7 550 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 PSEN1P49768 467 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 RILPL1Q5EBL4 403 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 NBPF11Q86T75 865 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 NOSTRINQ8IVI9 506 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 ENAHQ8N8S7 591 aaPredicted RBP9.44□□□□□ -0.9
UBR4-202ENST00000375224 CRAMP1Q96RY5 1269 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
UBR4-202ENST00000375224 HOXA10P31260 410 aaPredicted RBP9.44□□□□□ -0.9
UBR4-202ENST00000375224 PPP4CP60510 307 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 TXNRD3Q86VQ6 643 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 A0A1B0GVL5 298 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
UBR4-202ENST00000375224 CUTAO60888 179 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 USP5P45974 858 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 GRIPAP1Q4V328 841 aa9.44□□□□□ -0.9
UBR4-202ENST00000375224 MYH6P13533 1939 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 NDUFA8P51970 172 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.43□□□□□ -0.9
UBR4-202ENST00000375224 DIS3L2Q8IYB7 885 aaKnown RBP9.43□□□□□ -0.9
UBR4-202ENST00000375224 CEP57L1Q8IYX8 460 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 CTCFLQ8NI51 663 aaPredicted RBP9.43□□□□□ -0.9
UBR4-202ENST00000375224 DNAJC25Q9H1X3 360 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 ZNF287Q9HBT7 754 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 BRMS1Q9HCU9 246 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 CYP2D7A0A087X1C5 515 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 UFL1O94874 794 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 PLCG2P16885 1265 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 GPSM2P81274 684 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 LUZP1Q86V48 1076 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 TBC1D22AQ8WUA7 517 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 MCM9Q9NXL9 1143 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 TAOK2Q9UL54 1235 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 FAM237AA0A1B0GTK4 181 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 BECN2A8MW95 431 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 ZNF202O95125 648 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 IL1R1P14778 569 aa9.43□□□□□ -0.9
UBR4-202ENST00000375224 PTPAQ15257 358 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms