RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SEC31BQ9NQW1 1179 aa16.05■□□□□ 0.16
HMGCL-203ENST00000374490 GJB4Q9NTQ9 266 aa16.05■□□□□ 0.16
HMGCL-203ENST00000374490 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
HMGCL-203ENST00000374490 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
HMGCL-203ENST00000374490 MORC2Q9Y6X9 1032 aaPredicted RBP16.05■□□□□ 0.16
HMGCL-203ENST00000374490 MMP1P03956 469 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 PCP11498 1178 aaKnown RBP16.04■□□□□ 0.16
HMGCL-203ENST00000374490 CHRNDQ07001 517 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
HMGCL-203ENST00000374490 RILPL1Q5EBL4 403 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 SHC4Q6S5L8 630 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 LCORLQ8N3X6 602 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 SENP2Q9HC62 589 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 CEP131Q9UPN4 1083 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 ZNF804BA4D1E1 1349 aa16.04■□□□□ 0.16
HMGCL-203ENST00000374490 SMC2O95347 1197 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 TUBB4AP04350 444 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 HSPA6P17066 643 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 RXRAP19793 462 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
HMGCL-203ENST00000374490 CCZ1BP86790 482 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 CCZ1P86791 482 aaPredicted RBP16.03■□□□□ 0.16
HMGCL-203ENST00000374490 UBE4AQ14139 1066 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 OLFM4Q6UX06 510 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 ANKRD18AQ8IVF6 992 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 C16orf45Q96MC5 204 aaPredicted RBP16.03■□□□□ 0.16
HMGCL-203ENST00000374490 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 BCS1LQ9Y276 419 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
HMGCL-203ENST00000374490 ECM29Q5VYK3 1845 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 BCAMP50895 628 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 PPARAQ07869 468 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 CEP135Q66GS9 1140 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 TMED8Q6PL24 325 aaPredicted RBP16.02■□□□□ 0.16
HMGCL-203ENST00000374490 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
HMGCL-203ENST00000374490 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 ESR2Q92731 530 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.16
HMGCL-203ENST00000374490 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.16
HMGCL-203ENST00000374490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 CCP110O43303 1012 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 GYS1P13807 737 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 XBP1P17861 261 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 CYP7A1P22680 504 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 MYL5Q02045 173 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 NCAPHQ15003 741 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 ZNF710Q8N1W2 664 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 ANKRD7Q92527 254 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 MYL10Q9BUA6 226 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 NFIXQ14938 502 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 NYAP1Q6ZVC0 841 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 NBPF11Q86T75 865 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 DIS3L2Q8IYB7 885 aaKnown RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 ZNF654Q8IZM8 581 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 CRACR2BQ8N4Y2 399 aaPredicted RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 FBXW7Q969H0 707 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 RNF26Q9BY78 433 aaPredicted RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 DACH1Q9UI36 760 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 KCNH3Q9ULD8 1083 aa16.01■□□□□ 0.15
HMGCL-203ENST00000374490 MYO5AQ9Y4I1 1855 aaKnown RBP16.01■□□□□ 0.15
HMGCL-203ENST00000374490 C10orf71Q711Q0 1435 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 A0A087WWV3 80 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 BIN1O00499 593 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 SEMA3EO15041 775 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 PRKAB2O43741 272 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
HMGCL-203ENST00000374490 KANK3Q6NY19 840 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 CCAR2Q8N163 923 aaKnown RBP16■□□□□ 0.15
HMGCL-203ENST00000374490 CNBD1Q8NA66 436 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 FANCBQ8NB91 859 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 CNNM3Q8NE01 707 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 CCDC34Q96HJ3 373 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 TACC3Q9Y6A5 838 aa16■□□□□ 0.15
HMGCL-203ENST00000374490 A0A1B0GUL6 1792 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 PDS5AQ29RF7 1337 aaKnown RBP15.99■□□□□ 0.15
HMGCL-203ENST00000374490 BMP15O95972 392 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 CALM1P0DP23 149 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 CALM2P0DP24 149 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 CALM3P0DP25 149 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 DPEP1P16444 411 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 PTPREP23469 700 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 FANCCQ00597 558 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 AKAP17AQ02040 695 aaKnown RBP15.99■□□□□ 0.15
HMGCL-203ENST00000374490 CAVIN4Q5BKX8 364 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 ARHGAP27Q6ZUM4 889 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 C3orf67Q6ZVT6 689 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 TMC6Q7Z403 805 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 TRIML1Q8N9V2 468 aa15.99■□□□□ 0.15
HMGCL-203ENST00000374490 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms