RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 ICE2Q659A1 982 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 TRMT1LQ7Z2T5 733 aaKnown RBP12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 SLF2Q8IX21 1173 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 EYA3Q99504 573 aa12.75□□□□□ -0.37
RPRD1B-201ENST00000373433 PHACTR2O75167 634 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 BBOX1O75936 387 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 HMGB1P09429 215 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 TOP1P11387 765 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 GYS1P13807 737 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 LONRF2Q1L5Z9 754 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 TTC31Q49AM3 519 aaPredicted RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 RGS22Q8NE09 1264 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 DRC1Q96MC2 740 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 RANBP6O60518 1105 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 WDR24Q96S15 920 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 PDE11AQ9HCR9 933 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 ATF5Q9Y2D1 282 aaPredicted RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 APOBRQ0VD83 1088 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 SF3B3Q15393 1217 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 FUT8Q9BYC5 575 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 CRNKL1Q9BZJ0 848 aaKnown RBP12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 ARMT1Q9H993 441 aa12.74□□□□□ -0.37
RPRD1B-201ENST00000373433 XDHP47989 1333 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 KARSQ15046 597 aaKnown RBP12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 CTR9Q6PD62 1173 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 GPATCH11Q8N954 259 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 ONECUT3O60422 494 aaPredicted RBP12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 OTUD7BQ6GQQ9 843 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 FMR1NBQ8N0W7 255 aaPredicted RBP12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 GOLGA1Q92805 767 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 PPP2R2CQ9Y2T4 447 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 PDE6AP16499 860 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 MCAMP43121 646 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 RASGRF1Q13972 1273 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 DHX8Q14562 1220 aaKnown RBP12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 CHST3Q7LGC8 479 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 DPF2Q92785 391 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 MKNK2Q9HBH9 465 aa12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
RPRD1B-201ENST00000373433 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 KCNJ6P48051 423 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 GSTO1P78417 241 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 NSUN7Q8NE18 718 aaKnown RBP12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 GPR101Q96P66 508 aaPredicted RBP12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 LOC102724159A0A0B4J2E5 919 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 IVLP07476 585 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 PWP2Q15269 919 aaKnown RBP12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 MFSD6Q6ZSS7 791 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 NCOA7Q8NI08 942 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 NOC3LQ8WTT2 800 aaKnown RBP12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 DHX58Q96C10 678 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 UBXN6Q9BZV1 441 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 SCN11AQ9UI33 1791 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 PLSCR1O15162 318 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 ZBTB7AO95365 584 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 CHGBP05060 677 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 PLEKHA4Q9H4M7 779 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 LEMD3Q9Y2U8 911 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 JRKLQ9Y4A0 524 aa12.72□□□□□ -0.37
RPRD1B-201ENST00000373433 VWA3AA6NCI4 1184 aa12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 TMEM232C9JQI7 657 aa12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 NLRP12P59046 1061 aa12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 GTF2IP78347 998 aa12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 SCARF1Q14162 830 aa12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 CNKSR1Q969H4 720 aa12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
RPRD1B-201ENST00000373433 IFIT3O14879 490 aaKnown RBP12.71□□□□□ -0.38
RPRD1B-201ENST00000373433 SLC15A2Q16348 729 aa12.71□□□□□ -0.38
RPRD1B-201ENST00000373433 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.38
RPRD1B-201ENST00000373433 JAKMIP3Q5VZ66 844 aa12.71□□□□□ -0.38
RPRD1B-201ENST00000373433 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.38
RPRD1B-201ENST00000373433 RABGGTAQ92696 567 aa12.71□□□□□ -0.38
RPRD1B-201ENST00000373433 AATFQ9NY61 560 aaKnown RBP eCLIP12.71□□□□□ -0.38
RPRD1B-201ENST00000373433 CBFA2T2O43439 604 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 ADALQ6DHV7 355 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 TMOD2Q9NZR1 351 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 FAN1Q9Y2M0 1017 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 ZNF202O95125 648 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 NPR1P16066 1061 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 GNAT2P19087 354 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 MFSD14BQ5SR56 506 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 CLIC4Q9Y696 253 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 ATRNO75882 1429 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 KCPQ6ZWJ8 1503 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 CYP21A2P08686 494 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 BAG1Q99933 345 aaPredicted RBP12.7□□□□□ -0.38
RPRD1B-201ENST00000373433 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms