RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DCP1AQ9NPI6 582 aaPredicted RBP13.51□□□□□ -0.25
PDE6C-201ENST00000371447 PCDHA5Q9Y5H7 936 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 NWD2Q9ULI1 1742 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 CCDC196A0A1B0GTZ2 297 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 WNT7AO00755 349 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 STX17P56962 302 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 TFAP4Q01664 338 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 PLIN2Q99541 437 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 LRRC4BQ9NT99 713 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 SERTAD1Q9UHV2 236 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 COL1A1P02452 1464 aaPredicted RBP13.51□□□□□ -0.25
PDE6C-201ENST00000371447 PAPPAQ13219 1627 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 A0A1W2PQ27 194 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 A0A1W2PQ64 194 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 A0A1W2PQD8 194 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 UFL1O94874 794 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 TRIM37O94972 964 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 DEXIO95424 95 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 KRI1Q8N9T8 703 aaKnown RBP13.51□□□□□ -0.25
PDE6C-201ENST00000371447 CTCFLQ8NI51 663 aaPredicted RBP13.51□□□□□ -0.25
PDE6C-201ENST00000371447 SH3RF3Q8TEJ3 882 aaPredicted RBP13.51□□□□□ -0.25
PDE6C-201ENST00000371447 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
PDE6C-201ENST00000371447 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
PDE6C-201ENST00000371447 NLRP5P59047 1200 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 PTPAQ15257 358 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 WASF1Q92558 559 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 PNPLA7Q6ZV29 1317 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 COL14A1Q05707 1796 aaKnown RBP13.5□□□□□ -0.25
PDE6C-201ENST00000371447 ADAMTS3O15072 1205 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 MCM7P33993 719 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
PDE6C-201ENST00000371447 VPS72Q15906 364 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 PIK3AP1Q6ZUJ8 805 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
PDE6C-201ENST00000371447 FOXP4Q8IVH2 680 aaPredicted RBP13.5□□□□□ -0.25
PDE6C-201ENST00000371447 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
PDE6C-201ENST00000371447 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.5□□□□□ -0.25
PDE6C-201ENST00000371447 V9GYY5 206 aaPredicted RBP13.5□□□□□ -0.25
PDE6C-201ENST00000371447 VWA3AA6NCI4 1184 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
PDE6C-201ENST00000371447 PICALMQ13492 652 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 SMYD4Q8IYR2 804 aaPredicted RBP13.49□□□□□ -0.25
PDE6C-201ENST00000371447 RASSF8Q8NHQ8 419 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 UIMC1Q96RL1 719 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 MAP3K14Q99558 947 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 CSRNP2Q9H175 543 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 TNNT1P13805 278 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 FBXO33Q7Z6M2 555 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 TICAM2Q86XR7 235 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 SEPT12Q8IYM1 358 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
PDE6C-201ENST00000371447 SHISA4Q96DD7 197 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 FANCLQ9NW38 375 aa13.49□□□□□ -0.25
PDE6C-201ENST00000371447 NAA30Q147X3 362 aaPredicted RBP13.48□□□□□ -0.25
PDE6C-201ENST00000371447 METTL16Q86W50 562 aaKnown RBP13.48□□□□□ -0.25
PDE6C-201ENST00000371447 TMTC2Q8N394 836 aa13.48□□□□□ -0.25
PDE6C-201ENST00000371447 DPF2Q92785 391 aa13.48□□□□□ -0.25
PDE6C-201ENST00000371447 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.48□□□□□ -0.25
PDE6C-201ENST00000371447 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
PDE6C-201ENST00000371447 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
PDE6C-201ENST00000371447 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
PDE6C-201ENST00000371447 XBP1P17861 261 aa13.48□□□□□ -0.25
PDE6C-201ENST00000371447 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDE6C-201ENST00000371447 STAG2Q8N3U4 1231 aa13.48□□□□□ -0.25
PDE6C-201ENST00000371447 SRBD1Q8N5C6 995 aaKnown RBP13.48□□□□□ -0.25
PDE6C-201ENST00000371447 MAPK8IP1Q9UQF2 711 aa13.48□□□□□ -0.25
PDE6C-201ENST00000371447 ATP2B2Q01814 1243 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 PDE4BQ07343 736 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 SEC23AQ15436 765 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 LRRC8AQ8IWT6 810 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
PDE6C-201ENST00000371447 NLRP12P59046 1061 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 TPM4P67936 248 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 ANKRD2Q9GZV1 360 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 KAT14Q9H8E8 782 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 TSPY3P0CV98 308 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 TSPY8P0CW00 308 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 PLCD1P51178 756 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 KRBA2Q6ZNG9 492 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 EEF2KMTQ96G04 330 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 BLZF1Q9H2G9 400 aa13.47□□□□□ -0.25
PDE6C-201ENST00000371447 TM4SF1P30408 202 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 UBASH3AP57075 661 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 GPSM2P81274 684 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 MSL1Q68DK7 614 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 ATRNO75882 1429 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 TMEM232C9JQI7 657 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 KRT2P35908 639 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 FANCCQ00597 558 aa13.46□□□□□ -0.25
PDE6C-201ENST00000371447 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms