RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 METTL16Q86W50 562 aaKnown RBP33.26■■■□□ 2.92
SSBP3-204ENST00000371320 ARHGEF1Q92888 912 aaKnown RBP33.26■■■□□ 2.92
SSBP3-204ENST00000371320 CEP131Q9UPN4 1083 aa33.26■■■□□ 2.92
SSBP3-204ENST00000371320 PCDHB6Q9Y5E3 794 aa33.26■■■□□ 2.92
SSBP3-204ENST00000371320 BAZ2AQ9UIF9 1905 aaKnown RBP33.26■■■□□ 2.91
SSBP3-204ENST00000371320 CALM1P0DP23 149 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 CALM2P0DP24 149 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 CALM3P0DP25 149 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 PRDX5P30044 214 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 SPECC1Q5M775 1068 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 DCP1AQ9NPI6 582 aaPredicted RBP33.25■■■□□ 2.91
SSBP3-204ENST00000371320 IFNKQ9P0W0 207 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 COL24A1Q17RW2 1714 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 NPHP1O15259 732 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 TM4SF1P30408 202 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 FNBP4Q8N3X1 1017 aaPredicted RBP33.25■■■□□ 2.91
SSBP3-204ENST00000371320 XPO4Q9C0E2 1151 aaKnown RBP33.25■■■□□ 2.91
SSBP3-204ENST00000371320 CABP5Q9NP86 173 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 ATP8A2Q9NTI2 1148 aa33.25■■■□□ 2.91
SSBP3-204ENST00000371320 PRPF3O43395 683 aaKnown RBP33.24■■■□□ 2.91
SSBP3-204ENST00000371320 GSDMDP57764 484 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 FUT2Q10981 343 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 IMPACTQ9P2X3 320 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP33.24■■■□□ 2.913e-6■■■□□ 18.4
SSBP3-204ENST00000371320 SKILP12757 684 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 TROAPQ12815 778 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 PKN1Q16512 942 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 AMIGO3Q86WK7 504 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 VPS54Q9P1Q0 977 aa33.24■■■□□ 2.91
SSBP3-204ENST00000371320 HOOK1Q9UJC3 728 aaKnown RBP33.24■■■□□ 2.91
SSBP3-204ENST00000371320 BTAF1O14981 1849 aa33.23■■■□□ 2.91
SSBP3-204ENST00000371320 ORC4O43929 436 aa33.23■■■□□ 2.91
SSBP3-204ENST00000371320 ATP2B1P20020 1258 aa33.23■■■□□ 2.91
SSBP3-204ENST00000371320 ELOA2Q8IYF1 753 aaPredicted RBP33.23■■■□□ 2.91
SSBP3-204ENST00000371320 C16orf45Q96MC5 204 aaPredicted RBP33.23■■■□□ 2.91
SSBP3-204ENST00000371320 V9GY48 417 aaPredicted RBP33.23■■■□□ 2.91
SSBP3-204ENST00000371320 MYH2Q9UKX2 1941 aa33.23■■■□□ 2.91
SSBP3-204ENST00000371320 DDAH1O94760 285 aa33.22■■■□□ 2.91
SSBP3-204ENST00000371320 PLEKHA8P1O95397 391 aa33.22■■■□□ 2.91
SSBP3-204ENST00000371320 GRIN1Q05586 938 aa33.22■■■□□ 2.91
SSBP3-204ENST00000371320 FAM182BQ5T319 152 aa33.22■■■□□ 2.91
SSBP3-204ENST00000371320 PDCL3Q9H2J4 239 aa33.22■■■□□ 2.91
SSBP3-204ENST00000371320 TPD52L1Q16890 204 aaPredicted RBP33.22■■■□□ 2.91
SSBP3-204ENST00000371320 TMED8Q6PL24 325 aaPredicted RBP33.22■■■□□ 2.91
SSBP3-204ENST00000371320 TXNRD3Q86VQ6 643 aa33.22■■■□□ 2.91
SSBP3-204ENST00000371320 ZNF579Q8NAF0 562 aaKnown RBP33.22■■■□□ 2.91
SSBP3-204ENST00000371320 OSBPL5Q9H0X9 879 aaPredicted RBP33.22■■■□□ 2.91
SSBP3-204ENST00000371320 OLFM4Q6UX06 510 aa33.21■■■□□ 2.91
SSBP3-204ENST00000371320 SHISA4Q96DD7 197 aa33.21■■■□□ 2.91
SSBP3-204ENST00000371320 PHF20Q9BVI0 1012 aa33.21■■■□□ 2.91
SSBP3-204ENST00000371320 PCDHA5Q9Y5H7 936 aa33.21■■■□□ 2.91
SSBP3-204ENST00000371320 SRPRBQ9Y5M8 271 aaKnown RBP33.21■■■□□ 2.91
SSBP3-204ENST00000371320 LMOD1P29536 600 aaPredicted RBP33.21■■■□□ 2.91
SSBP3-204ENST00000371320 KRT2P35908 639 aa33.21■■■□□ 2.91
SSBP3-204ENST00000371320 EVX2Q03828 476 aa33.21■■■□□ 2.91
SSBP3-204ENST00000371320 FOXP4Q8IVH2 680 aaPredicted RBP33.21■■■□□ 2.91
SSBP3-204ENST00000371320 USP21Q9UK80 565 aa33.21■■■□□ 2.91
SSBP3-204ENST00000371320 hCG_1642624A0A1W2PR95 340 aa33.2■■■□□ 2.91
SSBP3-204ENST00000371320 SPTY2D1Q68D10 685 aaPredicted RBP33.2■■■□□ 2.91
SSBP3-204ENST00000371320 ARPP21Q9UBL0 812 aaPredicted RBP33.2■■■□□ 2.91
SSBP3-204ENST00000371320 JAG2Q9Y219 1238 aa33.2■■■□□ 2.91
SSBP3-204ENST00000371320 CCZ1BP86790 482 aa33.19■■■□□ 2.9
SSBP3-204ENST00000371320 CCZ1P86791 482 aaPredicted RBP33.19■■■□□ 2.9
SSBP3-204ENST00000371320 MDM2Q00987 491 aaPredicted RBP33.19■■■□□ 2.9
SSBP3-204ENST00000371320 MYL5Q02045 173 aa33.19■■■□□ 2.9
SSBP3-204ENST00000371320 AEBP2Q6ZN18 517 aaPredicted RBP33.19■■■□□ 2.9
SSBP3-204ENST00000371320 CERKQ8TCT0 537 aa33.19■■■□□ 2.9
SSBP3-204ENST00000371320 RFC4P35249 363 aa33.19■■■□□ 2.9
SSBP3-204ENST00000371320 TMTC3Q6ZXV5 915 aa33.19■■■□□ 2.9
SSBP3-204ENST00000371320 DZIP1Q86YF9 867 aaKnown RBP33.19■■■□□ 2.9
SSBP3-204ENST00000371320 MYH13Q9UKX3 1938 aa33.18■■■□□ 2.9
SSBP3-204ENST00000371320 RIOK3O14730 519 aaKnown RBP33.18■■■□□ 2.9
SSBP3-204ENST00000371320 POLR2DO15514 142 aaKnown RBP33.18■■■□□ 2.9
SSBP3-204ENST00000371320 SBK1Q52WX2 424 aa33.18■■■□□ 2.9
SSBP3-204ENST00000371320 FAM47AQ5JRC9 791 aa33.18■■■□□ 2.9
SSBP3-204ENST00000371320 MAP7D2Q96T17 732 aa33.18■■■□□ 2.9
SSBP3-204ENST00000371320 CYP2D6P10635 497 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 TNNT1P13805 278 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 FANCCQ00597 558 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 TMC6Q7Z403 805 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 IRS2Q9Y4H2 1338 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 TRIM75PA6NK02 468 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 FOXN1O15353 648 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 PDE4BQ07343 736 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 CTCFLQ8NI51 663 aaPredicted RBP33.17■■■□□ 2.9
SSBP3-204ENST00000371320 HSD3B7Q9H2F3 369 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 ANKIB1Q9P2G1 1089 aa33.17■■■□□ 2.9
SSBP3-204ENST00000371320 NMT2O60551 498 aa33.16■■■□□ 2.9
SSBP3-204ENST00000371320 POSTNQ15063 836 aa33.16■■■□□ 2.9
SSBP3-204ENST00000371320 BRMS1Q9HCU9 246 aa33.16■■■□□ 2.9
SSBP3-204ENST00000371320 NHSQ6T4R5 1651 aa33.16■■■□□ 2.9
SSBP3-204ENST00000371320 MYH6P13533 1939 aa33.16■■■□□ 2.9
SSBP3-204ENST00000371320 TRAPPC3LQ5T215 181 aa33.16■■■□□ 2.9
SSBP3-204ENST00000371320 SERTAD1Q9UHV2 236 aa33.16■■■□□ 2.9
SSBP3-204ENST00000371320 FAM205CA6NFA0 338 aa33.15■■■□□ 2.9
SSBP3-204ENST00000371320 ZBTB22O15209 634 aa33.15■■■□□ 2.9
SSBP3-204ENST00000371320 ATP1A3P13637 1013 aa33.15■■■□□ 2.9
SSBP3-204ENST00000371320 CCDC150Q8NCX0 1101 aa33.14■■■□□ 2.9
SSBP3-204ENST00000371320 TSC1Q92574 1164 aa33.14■■■□□ 2.9
SSBP3-204ENST00000371320 NOL10Q9BSC4 688 aaKnown RBP33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms