RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 KCNF1Q9H3M0 494 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 MKRN1Q9UHC7 482 aaKnown RBP14.79□□□□□ -0.04
GPC3-201ENST00000370818 CCDC196A0A1B0GTZ2 297 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 A0A1W2PQ27 194 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 A0A1W2PQ64 194 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 A0A1W2PQD8 194 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 SPTLC2O15270 562 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 SBK1Q52WX2 424 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 CCDC73Q6ZRK6 1079 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 CCDC82Q8N4S0 544 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 FAM200AQ8TCP9 573 aa14.79□□□□□ -0.04
GPC3-201ENST00000370818 ECM29Q5VYK3 1845 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 ORC4O43929 436 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 BBOX1O75936 387 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 SLC20A2Q08357 652 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 DIXDC1Q155Q3 683 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.78□□□□□ -0.04
GPC3-201ENST00000370818 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
GPC3-201ENST00000370818 MORC2Q9Y6X9 1032 aaPredicted RBP14.78□□□□□ -0.04
GPC3-201ENST00000370818 AP5Z1O43299 807 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 ATP2B4P23634 1241 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 TRIM29Q14134 588 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 SYCP1Q15431 976 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 TERF2Q15554 542 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 ZNF827Q17R98 1081 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 ANO6Q4KMQ2 910 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 IQCA1Q86XH1 822 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 FMR1NBQ8N0W7 255 aaPredicted RBP14.78□□□□□ -0.04
GPC3-201ENST00000370818 MRPS27Q92552 414 aaKnown RBP14.78□□□□□ -0.04
GPC3-201ENST00000370818 CD209Q9NNX6 404 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 GGA1Q9UJY5 639 aa14.78□□□□□ -0.04
GPC3-201ENST00000370818 TROAPQ12815 778 aa14.77□□□□□ -0.04
GPC3-201ENST00000370818 SLC39A14Q15043 492 aa14.77□□□□□ -0.04
GPC3-201ENST00000370818 SF3A1Q15459 793 aaKnown RBP14.77□□□□□ -0.04
GPC3-201ENST00000370818 AXDND1Q5T1B0 1012 aaPredicted RBP14.77□□□□□ -0.04
GPC3-201ENST00000370818 IFIT1BQ5T764 474 aaKnown RBP14.77□□□□□ -0.04
GPC3-201ENST00000370818 TRIM22Q8IYM9 498 aa14.77□□□□□ -0.04
GPC3-201ENST00000370818 WASF1Q92558 559 aa14.77□□□□□ -0.04
GPC3-201ENST00000370818 POLLQ9UGP5 575 aa14.77□□□□□ -0.04
GPC3-201ENST00000370818 A0A1B0GVL5 298 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 DEXIO95424 95 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 MMP1P03956 469 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 USP17L8P0C7I0 530 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 IL1R1P14778 569 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 CRAMP1Q96RY5 1269 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 MAP3K14Q99558 947 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 MCM9Q9NXL9 1143 aa14.77□□□□□ -0.05
GPC3-201ENST00000370818 MYH2Q9UKX2 1941 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 CCDC88AQ3V6T2 1871 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 CCDC66A2RUB6 948 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 CTAGE5O15320 804 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 NMT2O60551 498 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 KINO60870 393 aaKnown RBP14.76□□□□□ -0.05
GPC3-201ENST00000370818 NDUFA8P51970 172 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 FUT2Q10981 343 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 PPP2R5BQ15173 497 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 PTPAQ15257 358 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 FAM47AQ5JRC9 791 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
GPC3-201ENST00000370818 SH3RF3Q8TEJ3 882 aaPredicted RBP14.76□□□□□ -0.05
GPC3-201ENST00000370818 KCNJ14Q9UNX9 436 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 KIAA1551Q9HCM1 1747 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 WDHD1O75717 1129 aaPredicted RBP14.76□□□□□ -0.05
GPC3-201ENST00000370818 PPP4CP60510 307 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 LUZP1Q86V48 1076 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 TBC1D16Q8TBP0 767 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 TIGD1Q96MW7 591 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 CBX8Q9HC52 389 aa14.76□□□□□ -0.05
GPC3-201ENST00000370818 BTBD18B2RXH4 712 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 GNL2Q13823 731 aaKnown RBP14.75□□□□□ -0.05
GPC3-201ENST00000370818 SLC4A8Q2Y0W8 1093 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 CATIPQ7Z7H3 387 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 SHISA4Q96DD7 197 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 MARCKSP29966 332 aaPredicted RBP14.75□□□□□ -0.05
GPC3-201ENST00000370818 GSTO1P78417 241 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 C12orf60Q5U649 245 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 COL23A1Q86Y22 540 aaPredicted RBP14.75□□□□□ -0.05
GPC3-201ENST00000370818 NOSTRINQ8IVI9 506 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 DIS3L2Q8IYB7 885 aaKnown RBP14.75□□□□□ -0.05
GPC3-201ENST00000370818 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
GPC3-201ENST00000370818 RTFDC1Q9BY42 306 aaPredicted RBP14.75□□□□□ -0.05
GPC3-201ENST00000370818 RNF26Q9BY78 433 aaPredicted RBP14.75□□□□□ -0.05
GPC3-201ENST00000370818 LAMB1P07942 1786 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 PLSCR1O15162 318 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 SLC3A2P08195 630 aaKnown RBP14.74□□□□□ -0.05
GPC3-201ENST00000370818 RBM6P78332 1123 aaKnown RBP14.74□□□□□ -0.05
GPC3-201ENST00000370818 DNAJC25Q9H1X3 360 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 MROH7-TTC4A0A0A0MT08 1334 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 PLEKHA8P1O95397 391 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 TPM3P06753 285 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 PDE4BQ07343 736 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 PKN1Q16512 942 aa14.74□□□□□ -0.05
GPC3-201ENST00000370818 TULP2O00295 520 aa14.73□□□□□ -0.05
GPC3-201ENST00000370818 PPP6R2O75170 966 aa14.73□□□□□ -0.05
GPC3-201ENST00000370818 DDAH1O94760 285 aa14.73□□□□□ -0.05
GPC3-201ENST00000370818 CMA1P23946 247 aa14.73□□□□□ -0.05
GPC3-201ENST00000370818 USP5P45974 858 aa14.73□□□□□ -0.05
GPC3-201ENST00000370818 RCSD1Q6JBY9 416 aa14.73□□□□□ -0.05
GPC3-201ENST00000370818 FOXP1Q9H334 677 aaPredicted RBP14.73□□□□□ -0.05
GPC3-201ENST00000370818 BAG3O95817 575 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms