RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 ZNF853P0CG23 659 aa9.68□□□□□ -0.86
SFR1-201ENST00000369727 SRGNP10124 158 aa9.68□□□□□ -0.86
SFR1-201ENST00000369727 C1QTNF8P60827 252 aa9.68□□□□□ -0.86
SFR1-201ENST00000369727 CRTC2Q53ET0 693 aaPredicted RBP9.68□□□□□ -0.86
SFR1-201ENST00000369727 C9orf131Q5VYM1 1079 aa9.68□□□□□ -0.86
SFR1-201ENST00000369727 SCG3Q8WXD2 468 aaKnown RBP9.68□□□□□ -0.86
SFR1-201ENST00000369727 MASTLQ96GX5 879 aa9.68□□□□□ -0.86
SFR1-201ENST00000369727 NYXQ9GZU5 481 aa9.68□□□□□ -0.86
SFR1-201ENST00000369727 CCDC88AQ3V6T2 1871 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 GNB5O14775 395 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 GNAI1P63096 354 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 CCDC184Q52MB2 194 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 SYT9Q86SS6 491 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 ZNF34Q8IZ26 560 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 DDX21Q9NR30 783 aaKnown RBP eCLIP9.67□□□□□ -0.86
SFR1-201ENST00000369727 IFT57Q9NWB7 429 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 RIC1Q4ADV7 1423 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 SLX4Q8IY92 1834 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 CACNA1SQ13698 1873 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 FER1L6Q2WGJ9 1857 aa9.67□□□□□ -0.86
SFR1-201ENST00000369727 LGR5O75473 907 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 NPR1P16066 1061 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
SFR1-201ENST00000369727 DPYDQ12882 1025 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 PTK7Q13308 1070 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 KRT24Q2M2I5 525 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 PROSER3Q2NL68 480 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 SOGA3Q5TF21 947 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 ZNF280CQ8ND82 737 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 ZNF526Q8TF50 670 aaPredicted RBP9.66□□□□□ -0.86
SFR1-201ENST00000369727 CEP63Q96MT8 703 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 SLC30A3Q99726 388 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 MRS2Q9HD23 443 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 RNF181Q9P0P0 153 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 ANKIB1Q9P2G1 1089 aa9.66□□□□□ -0.86
SFR1-201ENST00000369727 FAM177BA6PVY3 158 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 PIK3R2O00459 728 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 ANXA1P04083 346 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 LMNB1P20700 586 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 CCDC27Q2M243 656 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 PARP10Q53GL7 1025 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 HSP90AB3PQ58FF7 597 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 DUSP27Q5VZP5 1158 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 PRPF40BQ6NWY9 871 aaKnown RBP9.65□□□□□ -0.86
SFR1-201ENST00000369727 COPS6Q7L5N1 327 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
SFR1-201ENST00000369727 ALDH16A1Q8IZ83 802 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 SUSD3Q96L08 255 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 HINFPQ9BQA5 517 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 C2orf49Q9BVC5 232 aaPredicted RBP9.65□□□□□ -0.86
SFR1-201ENST00000369727 BRD7Q9NPI1 651 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 DBF4Q9UBU7 674 aaPredicted RBP9.65□□□□□ -0.86
SFR1-201ENST00000369727 DICER1Q9UPY3 1922 aaKnown RBP9.65□□□□□ -0.86
SFR1-201ENST00000369727 ANKRD36CQ5JPF3 1778 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 UBN2Q6ZU65 1347 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 LTBP3Q9NS15 1303 aa9.65□□□□□ -0.86
SFR1-201ENST00000369727 NFKBIEO00221 500 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 GPTP24298 496 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 CRY2Q49AN0 593 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 SUSD4Q5VX71 490 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 PPP1R42Q7Z4L9 355 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 STAG2Q8N3U4 1231 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 XAGE3Q8WTP9 111 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 CHMP4AQ9BY43 222 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 CHPF2Q9P2E5 772 aa9.65□□□□□ -0.87
SFR1-201ENST00000369727 RNF123Q5XPI4 1314 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 ABCC12Q96J65 1359 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 TNRC6CQ9HCJ0 1690 aaKnown RBP9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L21D6R901 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 NTSR2O95665 410 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 PROCP04070 461 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 ALDH1B1P30837 517 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
SFR1-201ENST00000369727 VRTNQ9H8Y1 702 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 HYPKQ9NX55 129 aa9.64□□□□□ -0.87
SFR1-201ENST00000369727 KDM2BQ8NHM5 1336 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 ELOA3CA0A087WX78 387 aaPredicted RBP9.63□□□□□ -0.87
SFR1-201ENST00000369727 ELOA3DA6NLF2 546 aaPredicted RBP9.63□□□□□ -0.87
SFR1-201ENST00000369727 HOXA10P31260 410 aaPredicted RBP9.63□□□□□ -0.87
SFR1-201ENST00000369727 PRELPP51888 382 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 TYRO3Q06418 890 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 SPEM2Q0P670 501 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 TCIRG1Q13488 830 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 ELOA3BQ3SY89 546 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 CCDC93Q567U6 631 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 SLC10A5Q5PT55 438 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 ANKMY2Q8IV38 441 aa9.63□□□□□ -0.87
SFR1-201ENST00000369727 ELOA3Q8NG57 546 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms