RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 DNM1Q05193 864 aaKnown RBP16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 SH3BP5LQ7L8J4 393 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 RASGRP2Q7LDG7 609 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 MTA3Q9BTC8 594 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 OSBPL5Q9H0X9 879 aaPredicted RBP16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 PRPF40AO75400 957 aaKnown RBP16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 SLC3A2P08195 630 aaKnown RBP16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 DEKP35659 375 aaKnown RBP16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 CXCL9Q07325 125 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 RESTQ13127 1097 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 SART3Q15020 963 aaKnown RBP16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
HMGCS2-201ENST00000369406 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 GABPAQ06546 454 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 TCP10Q12799 353 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 TROAPQ12815 778 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 ILDR2Q71H61 639 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 FAM184AQ8NB25 1140 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 MRIQ9BWK5 157 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 TDRD3Q9H7E2 651 aaKnown RBP16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 ZNRF3Q9ULT6 936 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 SBF1O95248 1867 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 MYH4Q9Y623 1939 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 ERICH2A1L162 156 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 PDCP20941 246 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 HDLBPQ00341 1268 aaKnown RBP16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 SHROOM1Q2M3G4 852 aaPredicted RBP16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 SOGA3Q5TF21 947 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 NBPF11Q86T75 865 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 MKNK2Q9HBH9 465 aa16.48■□□□□ 0.23
HMGCS2-201ENST00000369406 DDTLA6NHG4 134 aaPredicted RBP16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 FAM196BA6NMK8 535 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 CPLX1O14810 134 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 GADD45BO75293 160 aaPredicted RBP16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 RTN1Q16799 776 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 NIM1KQ8IY84 436 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 CHMP4CQ96CF2 233 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 TAOK2Q9UL54 1235 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 PLEKHA8P1O95397 391 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 CLEC10AQ8IUN9 316 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 GPT2Q8TD30 523 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 SHISA4Q96DD7 197 aa16.47■□□□□ 0.23
HMGCS2-201ENST00000369406 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.23
HMGCS2-201ENST00000369406 FUT2Q10981 343 aa16.46■□□□□ 0.23
HMGCS2-201ENST00000369406 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
HMGCS2-201ENST00000369406 AMOTL1Q8IY63 956 aa16.46■□□□□ 0.23
HMGCS2-201ENST00000369406 GZF1Q9H116 711 aaPredicted RBP16.46■□□□□ 0.23
HMGCS2-201ENST00000369406 SHMT1P34896 483 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 IDI2Q9BXS1 227 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 SLC26A6Q9BXS9 759 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 hCG_1642624A0A1W2PR95 340 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 KIF28PB7ZC32 967 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 H3BQV1 296 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 AKR1B1P15121 316 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 TMTC2Q8N394 836 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 VPS33BQ9H267 617 aa16.45■□□□□ 0.22
HMGCS2-201ENST00000369406 CLRN2A0PK11 232 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 SPDYE2BA6NHP3 402 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 FIBPO43427 364 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 EGFRP00533 1210 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 IFNAR1P17181 557 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 SLC35G1Q2M3R5 365 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 FTOQ9C0B1 505 aaKnown RBP eCLIP16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 SYNE3Q6ZMZ3 975 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 ZNF444Q8N0Y2 327 aaPredicted RBP16.44■□□□□ 0.22
HMGCS2-201ENST00000369406 CATIPQ7Z7H3 387 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 FBXO18Q8NFZ0 1043 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 NEDD1Q8NHV4 660 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 ANKS1AQ92625 1134 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 CEP95Q96GE4 821 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 ALG1Q9BT22 464 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 SCAF8Q9UPN6 1271 aaKnown RBP16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 RCAN1P53805 252 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 C8orf76Q96K31 380 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 SPON1Q9HCB6 807 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
HMGCS2-201ENST00000369406 TFIP11Q9UBB9 837 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms