RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 HLA-DOAP06340 250 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 ARHGAP27Q6ZUM4 889 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 IDI2Q9BXS1 227 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 SPDYE2BA6NHP3 402 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 SPDYE6P0CI01 402 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 RASA1P20936 1047 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 PRELPP51888 382 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 ZNF654Q8IZM8 581 aa22.73■■□□□ 1.23
CHTOP-204ENST00000368694 EIF6P56537 245 aaKnown RBP22.72■■□□□ 1.23
CHTOP-204ENST00000368694 ZSCAN29Q8IWY8 852 aaPredicted RBP22.72■■□□□ 1.23
CHTOP-204ENST00000368694 TMOD2Q9NZR1 351 aa22.72■■□□□ 1.23
CHTOP-204ENST00000368694 FAM198AQ9UFP1 575 aa22.72■■□□□ 1.23
CHTOP-204ENST00000368694 SERPINB13Q9UIV8 391 aa22.72■■□□□ 1.23
CHTOP-204ENST00000368694 KIF3AQ9Y496 699 aa22.72■■□□□ 1.23
CHTOP-204ENST00000368694 ADD1P35611 737 aaKnown RBP22.72■■□□□ 1.23
CHTOP-204ENST00000368694 ZFPM1Q8IX07 1006 aa22.72■■□□□ 1.23
CHTOP-204ENST00000368694 NUP133Q8WUM0 1156 aa22.72■■□□□ 1.23
CHTOP-204ENST00000368694 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
CHTOP-204ENST00000368694 ZSCAN22P10073 491 aaPredicted RBP22.71■■□□□ 1.23
CHTOP-204ENST00000368694 CPLX2Q6PUV4 134 aaKnown RBP22.71■■□□□ 1.23
CHTOP-204ENST00000368694 SRCAPQ6ZRS2 3230 aa22.71■■□□□ 1.23
CHTOP-204ENST00000368694 CDC27P30260 824 aa22.7■■□□□ 1.23
CHTOP-204ENST00000368694 MCM4P33991 863 aa22.7■■□□□ 1.23
CHTOP-204ENST00000368694 CATIPQ7Z7H3 387 aa22.7■■□□□ 1.23
CHTOP-204ENST00000368694 DHX36Q9H2U1 1008 aaKnown RBP22.7■■□□□ 1.23
CHTOP-204ENST00000368694 CLRN2A0PK11 232 aa22.7■■□□□ 1.22
CHTOP-204ENST00000368694 CDKL5O76039 1030 aa22.7■■□□□ 1.22
CHTOP-204ENST00000368694 PDIA4P13667 645 aaKnown RBP22.7■■□□□ 1.22
CHTOP-204ENST00000368694 GJA3Q9Y6H8 435 aa22.7■■□□□ 1.22
CHTOP-204ENST00000368694 DICER1Q9UPY3 1922 aaKnown RBP22.69■■□□□ 1.22
CHTOP-204ENST00000368694 FZD9O00144 591 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 NPM3O75607 178 aaKnown RBP22.69■■□□□ 1.22
CHTOP-204ENST00000368694 BAG4O95429 457 aaKnown RBP22.69■■□□□ 1.22
CHTOP-204ENST00000368694 GABPAQ06546 454 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 RTN1Q16799 776 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 MTMR6Q9Y217 621 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 NID2Q14112 1375 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 RCAN1P53805 252 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 CRACR2BQ8N4Y2 399 aaPredicted RBP22.69■■□□□ 1.22
CHTOP-204ENST00000368694 IL17RBQ9NRM6 502 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 SWAP70Q9UH65 585 aa22.69■■□□□ 1.22
CHTOP-204ENST00000368694 SIPA1L1O43166 1804 aa22.68■■□□□ 1.22
CHTOP-204ENST00000368694 H3BQV1 296 aa22.68■■□□□ 1.22
CHTOP-204ENST00000368694 RPS12P25398 132 aaKnown RBP22.68■■□□□ 1.22
CHTOP-204ENST00000368694 CCDC178Q5BJE1 867 aa22.68■■□□□ 1.22
CHTOP-204ENST00000368694 IFFO2Q5TF58 517 aa22.68■■□□□ 1.22
CHTOP-204ENST00000368694 DDTLA6NHG4 134 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-204ENST00000368694 TCP10L2B9ZVM9 353 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 F13A1P00488 732 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 FOSBP53539 338 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 FOXD4L6Q3SYB3 417 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-204ENST00000368694 FOXD4L3Q6VB84 417 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-204ENST00000368694 CLEC17AQ6ZS10 378 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 CDC37L1Q7L3B6 337 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 FANCBQ8NB91 859 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 MYOZ2Q9NPC6 264 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 FAM217BQ9NTX9 383 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-204ENST00000368694 ORC3Q9UBD5 711 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-204ENST00000368694 ZNF70Q9UC06 446 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-204ENST00000368694 SBF1O95248 1867 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 CCDC196A0A1B0GTZ2 297 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 MYO1BO43795 1136 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 ENTPD3O75355 529 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 LMNB1P20700 586 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 DGKHQ86XP1 1220 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 MTMR14Q8NCE2 650 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 TRIM34Q9BYJ4 488 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 EHD4Q9H223 541 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 KAT14Q9H8E8 782 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 VEZTQ9HBM0 779 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 TCP11L1Q9NUJ3 509 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 PI4KBQ9UBF8 816 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 STX8Q9UNK0 236 aa22.67■■□□□ 1.22
CHTOP-204ENST00000368694 SHTN1A0MZ66 631 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 DDX11L8A8MPP1 907 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 CALM1P0DP23 149 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 CALM2P0DP24 149 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 CALM3P0DP25 149 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 RCSD1Q6JBY9 416 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 PHKBQ93100 1093 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 GOLGA6L22H0YM25 854 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 DDAH1O94760 285 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 FDPSP14324 419 aaKnown RBP22.66■■□□□ 1.22
CHTOP-204ENST00000368694 GMPSP49915 693 aaPredicted RBP22.66■■□□□ 1.22
CHTOP-204ENST00000368694 SPDYE2Q495Y8 402 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 SH3BP5LQ7L8J4 393 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 NEDD1Q8NHV4 660 aa22.66■■□□□ 1.22
CHTOP-204ENST00000368694 ZNF541Q9H0D2 1346 aa22.65■■□□□ 1.22
CHTOP-204ENST00000368694 MCTP1Q6DN14 999 aa22.65■■□□□ 1.22
CHTOP-204ENST00000368694 SHMT1P34896 483 aa22.64■■□□□ 1.22
CHTOP-204ENST00000368694 TROAPQ12815 778 aa22.64■■□□□ 1.22
CHTOP-204ENST00000368694 GSE1Q14687 1217 aa22.64■■□□□ 1.22
CHTOP-204ENST00000368694 NTRK3Q16288 839 aa22.64■■□□□ 1.22
CHTOP-204ENST00000368694 CHAMP1Q96JM3 812 aa22.64■■□□□ 1.22
CHTOP-204ENST00000368694 ATP6V1DQ9Y5K8 247 aa22.64■■□□□ 1.22
CHTOP-204ENST00000368694 ATRNL1Q5VV63 1379 aa22.64■■□□□ 1.21
CHTOP-204ENST00000368694 WNT10BO00744 389 aa22.64■■□□□ 1.21
CHTOP-204ENST00000368694 MMP14P50281 582 aa22.64■■□□□ 1.21
CHTOP-204ENST00000368694 PPP2R5BQ15173 497 aa22.64■■□□□ 1.21
CHTOP-204ENST00000368694 FERMT3Q86UX7 667 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms