RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
TPM3-209ENST00000368527 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
TPM3-209ENST00000368527 MIGA1Q8NAN2 632 aa11.72□□□□□ -0.53
TPM3-209ENST00000368527 CACTINQ8WUQ7 758 aaKnown RBP11.72□□□□□ -0.53
TPM3-209ENST00000368527 NSUN4Q96CB9 384 aaKnown RBP11.72□□□□□ -0.53
TPM3-209ENST00000368527 AATFQ9NY61 560 aaKnown RBP eCLIP11.72□□□□□ -0.53
TPM3-209ENST00000368527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
TPM3-209ENST00000368527 RTCBQ9Y3I0 505 aaKnown RBP11.72□□□□□ -0.53
TPM3-209ENST00000368527 NHSQ6T4R5 1651 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 MROH7-TTC4A0A0A0MT08 1334 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 BAG3O95817 575 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 SKILP12757 684 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.53
TPM3-209ENST00000368527 MARCKSP29966 332 aaPredicted RBP11.71□□□□□ -0.53
TPM3-209ENST00000368527 GYG1P46976 350 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 GALNT17Q6IS24 598 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 FCHSD1Q86WN1 690 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 CCDC144CPQ8IYA2 1237 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.53
TPM3-209ENST00000368527 ENAHQ8N8S7 591 aaPredicted RBP11.71□□□□□ -0.53
TPM3-209ENST00000368527 ANKS1AQ92625 1134 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 PHF20Q9BVI0 1012 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.53
TPM3-209ENST00000368527 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.53
TPM3-209ENST00000368527 MYO5AQ9Y4I1 1855 aaKnown RBP11.71□□□□□ -0.53
TPM3-209ENST00000368527 KIAA1551Q9HCM1 1747 aa11.71□□□□□ -0.54
TPM3-209ENST00000368527 CACNA1SQ13698 1873 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 DLEC1Q9Y238 1755 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
TPM3-209ENST00000368527 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
TPM3-209ENST00000368527 BTBD18B2RXH4 712 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
TPM3-209ENST00000368527 TNNT1P13805 278 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 RXRAP19793 462 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
TPM3-209ENST00000368527 FANCCQ00597 558 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 POSTNQ15063 836 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 PTPN14Q15678 1187 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 TBC1D9BQ66K14 1250 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 TMTC3Q6ZXV5 915 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
TPM3-209ENST00000368527 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 NUP133Q8WUM0 1156 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 SMARCE1Q969G3 411 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 AIFM3Q96NN9 605 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 MYL10Q9BUA6 226 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 GTPBP4Q9BZE4 634 aaKnown RBP11.7□□□□□ -0.54
TPM3-209ENST00000368527 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
TPM3-209ENST00000368527 ECM29Q5VYK3 1845 aa11.7□□□□□ -0.54
TPM3-209ENST00000368527 ROBO3Q96MS0 1386 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 GOLGA6L9A6NEM1 432 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 PPFIA3O75145 1194 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 MECOMQ03112 1051 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 TROAPQ12815 778 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 NCAPHQ15003 741 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
TPM3-209ENST00000368527 CTR9Q6PD62 1173 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 TMC4Q7Z404 712 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 ZNF804AQ7Z570 1209 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 DGKHQ86XP1 1220 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 MPNDQ8N594 471 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 ENOX1Q8TC92 643 aaKnown RBP11.69□□□□□ -0.54
TPM3-209ENST00000368527 SDR42E1Q8WUS8 393 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 GJB4Q9NTQ9 266 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 TCP11L1Q9NUJ3 509 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 IFNKQ9P0W0 207 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 NRBP1Q9UHY1 535 aa11.69□□□□□ -0.54
TPM3-209ENST00000368527 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
TPM3-209ENST00000368527 XDHP47989 1333 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 USP17L12C9JPN9 530 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 USP17L21D6R901 530 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 SNAP23O00161 211 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 KCNQ2O43526 872 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 SERPINC1P01008 464 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 PLCG2P16885 1265 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 TOB1P50616 345 aaPredicted RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 PPP4CP60510 307 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 CCZ1BP86790 482 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 CCZ1P86791 482 aaPredicted RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 FUT2Q10981 343 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 LRMPQ12912 555 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 GRAPQ13588 217 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 CCDC144BQ3MJ40 725 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 CEP135Q66GS9 1140 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 ARL6IP4Q66PJ3 421 aaKnown RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 FILIP1Q7Z7B0 1213 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 DZIP1Q86YF9 867 aaKnown RBP11.68□□□□□ -0.54
TPM3-209ENST00000368527 STK11IPQ8N1F8 1099 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 KIF18AQ8NI77 898 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 SPATA20Q8TB22 786 aa11.68□□□□□ -0.54
TPM3-209ENST00000368527 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms