RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 AMIGO3Q86WK7 504 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 ZKSCAN3Q9BRR0 538 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 MKRN1Q9UHC7 482 aaKnown RBP17.16■□□□□ 0.34
C1orf43-206ENST00000368521 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
C1orf43-206ENST00000368521 LAMB1P07942 1786 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 FAM196AQ6ZSG2 479 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 KCNF1Q9H3M0 494 aa17.16■□□□□ 0.34
C1orf43-206ENST00000368521 SMTNL1A8MU46 457 aa17.15■□□□□ 0.34
C1orf43-206ENST00000368521 BTBD18B2RXH4 712 aa17.15■□□□□ 0.34
C1orf43-206ENST00000368521 IKBKBO14920 756 aa17.15■□□□□ 0.34
C1orf43-206ENST00000368521 LDHCP07864 332 aa17.15■□□□□ 0.34
C1orf43-206ENST00000368521 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
C1orf43-206ENST00000368521 ZNF772Q68DY9 489 aaPredicted RBP17.15■□□□□ 0.34
C1orf43-206ENST00000368521 ZNF804AQ7Z570 1209 aa17.15■□□□□ 0.34
C1orf43-206ENST00000368521 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
C1orf43-206ENST00000368521 PHF20Q9BVI0 1012 aa17.15■□□□□ 0.34
C1orf43-206ENST00000368521 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
C1orf43-206ENST00000368521 MROH7-TTC4A0A0A0MT08 1334 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 PRDX5P30044 214 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 PKN1Q16512 942 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 TMC4Q7Z404 712 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 NUP133Q8WUM0 1156 aa17.14■□□□□ 0.33
C1orf43-206ENST00000368521 HOOK1Q9UJC3 728 aaKnown RBP17.14■□□□□ 0.33
C1orf43-206ENST00000368521 KLRG2A4D1S0 409 aaPredicted RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 BBOX1O75936 387 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 BAG3O95817 575 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 LDHBP07195 334 aaKnown RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 MARCKSP29966 332 aaPredicted RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 TXNRD3Q86VQ6 643 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 DGKHQ86XP1 1220 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 DZIP1Q86YF9 867 aaKnown RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 PRIMPOLQ96LW4 560 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 TCP11L1Q9NUJ3 509 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 AATFQ9NY61 560 aaKnown RBP eCLIP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 TPM4P67936 248 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 C12orf60Q5U649 245 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 SEPT12Q8IYM1 358 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 STK11IPQ8N1F8 1099 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 ZNF830Q96NB3 372 aaPredicted RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 FAM13BQ9NYF5 915 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 ANKIB1Q9P2G1 1089 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 FBXO2Q9UK22 296 aaPredicted RBP17.13■□□□□ 0.33
C1orf43-206ENST00000368521 KCNH3Q9ULD8 1083 aa17.13■□□□□ 0.33
C1orf43-206ENST00000368521 UBR3Q6ZT12 1888 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 BAZ2AQ9UIF9 1905 aaKnown RBP17.12■□□□□ 0.33
C1orf43-206ENST00000368521 NPHP1O15259 732 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 CCDC186Q7Z3E2 898 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
C1orf43-206ENST00000368521 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
C1orf43-206ENST00000368521 LRRC4BQ9NT99 713 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 IMPACTQ9P2X3 320 aa17.12■□□□□ 0.33
C1orf43-206ENST00000368521 MYH2Q9UKX2 1941 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 GYS1P13807 737 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 IL1R1P14778 569 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 KRT2P35908 639 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 ST5P78524 1137 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 CHAF1AQ13111 956 aaPredicted RBP17.11■□□□□ 0.33
C1orf43-206ENST00000368521 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 FAM163AQ96GL9 167 aaPredicted RBP17.11■□□□□ 0.33
C1orf43-206ENST00000368521 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 KCNJ14Q9UNX9 436 aa17.11■□□□□ 0.33
C1orf43-206ENST00000368521 CYP2D7A0A087X1C5 515 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
C1orf43-206ENST00000368521 UBE2Q2LH0YL09 131 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 PTGS1P23219 599 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 KIF5BP33176 963 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 DPCR1Q3MIW9 517 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 CT47A1Q5JQC4 288 aaPredicted RBP17.1■□□□□ 0.33
C1orf43-206ENST00000368521 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 DRC7Q8IY82 874 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 RPGRQ92834 1020 aaKnown RBP17.1■□□□□ 0.33
C1orf43-206ENST00000368521 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 GSDMDP57764 484 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 MDM2Q00987 491 aaPredicted RBP17.1■□□□□ 0.33
C1orf43-206ENST00000368521 AMOTL1Q8IY63 956 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 AOPEPQ8N6M6 819 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 TRIML1Q8N9V2 468 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 TNFRSF25Q93038 417 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 SH3GLB2Q9NR46 395 aa17.1■□□□□ 0.33
C1orf43-206ENST00000368521 R3HCC1Q9Y3T6 440 aaKnown RBP17.1■□□□□ 0.33
C1orf43-206ENST00000368521 CNTNAP5Q8WYK1 1306 aa17.09■□□□□ 0.33
C1orf43-206ENST00000368521 TRIM75PA6NK02 468 aa17.09■□□□□ 0.33
C1orf43-206ENST00000368521 PLCG2P16885 1265 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms