RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 RNF208Q9H0X6 261 aa21.46■■□□□ 1.03
C1orf43-204ENST00000368518 TMOD4Q9NZQ9 345 aa21.46■■□□□ 1.03
C1orf43-204ENST00000368518 MYH1P12882 1939 aa21.45■■□□□ 1.02
C1orf43-204ENST00000368518 ADCY3O60266 1144 aa21.45■■□□□ 1.02
C1orf43-204ENST00000368518 IFIT2P09913 472 aaKnown RBP21.45■■□□□ 1.02
C1orf43-204ENST00000368518 ELNP15502 786 aa21.45■■□□□ 1.02
C1orf43-204ENST00000368518 BACE1P56817 501 aa21.45■■□□□ 1.02
C1orf43-204ENST00000368518 UBXN2AP68543 259 aa21.45■■□□□ 1.02
C1orf43-204ENST00000368518 SLAIN1Q8ND83 568 aa21.45■■□□□ 1.02
C1orf43-204ENST00000368518 DNAJC2Q99543 621 aaKnown RBP21.45■■□□□ 1.02
C1orf43-204ENST00000368518 ZBTB21Q9ULJ3 1066 aa21.45■■□□□ 1.02
C1orf43-204ENST00000368518 FAM110CQ1W6H9 321 aa21.44■■□□□ 1.02
C1orf43-204ENST00000368518 COA7Q96BR5 231 aa21.44■■□□□ 1.02
C1orf43-204ENST00000368518 SHISA4Q96DD7 197 aa21.44■■□□□ 1.02
C1orf43-204ENST00000368518 GOLIM4O00461 696 aa21.43■■□□□ 1.02
C1orf43-204ENST00000368518 GCLCP48506 637 aaPredicted RBP21.43■■□□□ 1.02
C1orf43-204ENST00000368518 IRX3P78415 501 aaPredicted RBP21.43■■□□□ 1.02
C1orf43-204ENST00000368518 TTF1Q15361 905 aaPredicted RBP21.43■■□□□ 1.02
C1orf43-204ENST00000368518 SLC9C2Q5TAH2 1124 aa21.43■■□□□ 1.02
C1orf43-204ENST00000368518 C20orf194Q5TEA3 1177 aa21.43■■□□□ 1.02
C1orf43-204ENST00000368518 CERS3Q8IU89 383 aa21.43■■□□□ 1.02
C1orf43-204ENST00000368518 UNC93B1Q9H1C4 597 aa21.43■■□□□ 1.02
C1orf43-204ENST00000368518 MAGEB6P1A0A0J9YX57 407 aa21.42■■□□□ 1.02
C1orf43-204ENST00000368518 USP17L10C9JJH3 530 aa21.42■■□□□ 1.02
C1orf43-204ENST00000368518 GH2P01242 217 aa21.42■■□□□ 1.02
C1orf43-204ENST00000368518 PDE6AP16499 860 aa21.42■■□□□ 1.02
C1orf43-204ENST00000368518 P2RX7Q99572 595 aaKnown RBP21.42■■□□□ 1.02
C1orf43-204ENST00000368518 RIOK1Q9BRS2 568 aaKnown RBP21.42■■□□□ 1.02
C1orf43-204ENST00000368518 PEX10O60683 326 aa21.41■■□□□ 1.02
C1orf43-204ENST00000368518 RAB11FIP3O75154 756 aa21.41■■□□□ 1.02
C1orf43-204ENST00000368518 INHAP05111 366 aa21.41■■□□□ 1.02
C1orf43-204ENST00000368518 EDC3Q96F86 508 aaKnown RBP21.41■■□□□ 1.02
C1orf43-204ENST00000368518 GINM1Q9NU53 330 aa21.41■■□□□ 1.02
C1orf43-204ENST00000368518 SERPINB13Q9UIV8 391 aa21.41■■□□□ 1.02
C1orf43-204ENST00000368518 ZNF532Q9HCE3 1301 aa21.4■■□□□ 1.02
C1orf43-204ENST00000368518 C19orf81C9J6K1 198 aa21.4■■□□□ 1.02
C1orf43-204ENST00000368518 GJB1P08034 283 aa21.4■■□□□ 1.02
C1orf43-204ENST00000368518 GJA8P48165 433 aa21.4■■□□□ 1.02
C1orf43-204ENST00000368518 TTC6Q86TZ1 520 aa21.4■■□□□ 1.02
C1orf43-204ENST00000368518 NKX2-3Q8TAU0 364 aa21.4■■□□□ 1.02
C1orf43-204ENST00000368518 CHMP4BQ9H444 224 aaKnown RBP21.4■■□□□ 1.02
C1orf43-204ENST00000368518 DOCK3Q8IZD9 2030 aa21.39■■□□□ 1.02
C1orf43-204ENST00000368518 POLR3DP05423 398 aaPredicted RBP21.39■■□□□ 1.01
C1orf43-204ENST00000368518 PLCD1P51178 756 aa21.39■■□□□ 1.01
C1orf43-204ENST00000368518 IRF5Q13568 498 aa21.39■■□□□ 1.01
C1orf43-204ENST00000368518 RAB3GAP1Q15042 981 aa21.39■■□□□ 1.01
C1orf43-204ENST00000368518 ZYXQ15942 572 aaKnown RBP21.39■■□□□ 1.01
C1orf43-204ENST00000368518 TATDN1Q6P1N9 297 aa21.39■■□□□ 1.01
C1orf43-204ENST00000368518 TMED8Q6PL24 325 aaPredicted RBP21.39■■□□□ 1.01
C1orf43-204ENST00000368518 PXYLP1Q8TE99 480 aa21.39■■□□□ 1.01
C1orf43-204ENST00000368518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.39■■□□□ 1.01
C1orf43-204ENST00000368518 GCC1Q96CN9 775 aa21.39■■□□□ 1.01
C1orf43-204ENST00000368518 BOLA2Q9H3K6 86 aa21.39■■□□□ 1.01
C1orf43-204ENST00000368518 HOXA7P31268 230 aaPredicted RBP21.38■■□□□ 1.01
C1orf43-204ENST00000368518 HERVK_113P62684 666 aa21.38■■□□□ 1.01
C1orf43-204ENST00000368518 CERKLQ49MI3 558 aaPredicted RBP21.38■■□□□ 1.01
C1orf43-204ENST00000368518 USP17L2Q6R6M4 530 aa21.38■■□□□ 1.01
C1orf43-204ENST00000368518 U2AF1L4Q8WU68 220 aaKnown RBP21.38■■□□□ 1.01
C1orf43-204ENST00000368518 FEZ1Q99689 392 aa21.38■■□□□ 1.01
C1orf43-204ENST00000368518 CRNKL1Q9BZJ0 848 aaKnown RBP21.38■■□□□ 1.01
C1orf43-204ENST00000368518 EHD4Q9H223 541 aa21.38■■□□□ 1.01
C1orf43-204ENST00000368518 EMILIN3Q9NT22 766 aa21.38■■□□□ 1.01
C1orf43-204ENST00000368518 EVX2Q03828 476 aa21.37■■□□□ 1.01
C1orf43-204ENST00000368518 ABCB5Q2M3G0 1257 aa21.37■■□□□ 1.01
C1orf43-204ENST00000368518 SLFNL1Q499Z3 407 aa21.37■■□□□ 1.01
C1orf43-204ENST00000368518 TXNRD2Q9NNW7 524 aa21.37■■□□□ 1.01
C1orf43-204ENST00000368518 PAG1Q9NWQ8 432 aa21.37■■□□□ 1.01
C1orf43-204ENST00000368518 MORF4L1Q9UBU8 362 aa21.37■■□□□ 1.01
C1orf43-204ENST00000368518 NAV1Q8NEY1 1877 aa21.37■■□□□ 1.01
C1orf43-204ENST00000368518 TCRBV5S4A2TA0A5A2 114 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 SHMT1P34896 483 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 LCORLQ8N3X6 602 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 GPRC5AQ8NFJ5 357 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 SDR42E1Q8WUS8 393 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 DPF3Q92784 378 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 DEFB118Q96PH6 123 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 PAGR1Q9BTK6 254 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 MCM9Q9NXL9 1143 aa21.36■■□□□ 1.01
C1orf43-204ENST00000368518 SMARCA5O60264 1052 aaPredicted RBP21.35■■□□□ 1.01
C1orf43-204ENST00000368518 SGPL1O95470 568 aa21.35■■□□□ 1.01
C1orf43-204ENST00000368518 TFRCP02786 760 aaKnown RBP21.35■■□□□ 1.01
C1orf43-204ENST00000368518 ACER1Q8TDN7 264 aa21.35■■□□□ 1.01
C1orf43-204ENST00000368518 ARMT1Q9H993 441 aa21.35■■□□□ 1.01
C1orf43-204ENST00000368518 CABP5Q9NP86 173 aa21.35■■□□□ 1.01
C1orf43-204ENST00000368518 GJD2Q9UKL4 321 aa21.35■■□□□ 1.01
C1orf43-204ENST00000368518 H0YGN5 161 aa21.34■■□□□ 1.01
C1orf43-204ENST00000368518 CYP2D6P10635 497 aa21.34■■□□□ 1.01
C1orf43-204ENST00000368518 ATP5JP18859 108 aa21.34■■□□□ 1.01
C1orf43-204ENST00000368518 PDE3AQ14432 1141 aa21.34■■□□□ 1.01
C1orf43-204ENST00000368518 HABP4Q5JVS0 413 aaKnown RBP21.34■■□□□ 1.01
C1orf43-204ENST00000368518 RBPJLQ9UBG7 517 aa21.34■■□□□ 1.01
C1orf43-204ENST00000368518 DDX60LQ5H9U9 1706 aaKnown RBP21.34■■□□□ 1.01
C1orf43-204ENST00000368518 MPHOSPH10O00566 681 aaKnown RBP21.33■■□□□ 1.01
C1orf43-204ENST00000368518 FARP2O94887 1054 aaPredicted RBP21.33■■□□□ 1.01
C1orf43-204ENST00000368518 CHGBP05060 677 aa21.33■■□□□ 1.01
C1orf43-204ENST00000368518 TRIM32Q13049 653 aa21.33■■□□□ 1.01
C1orf43-204ENST00000368518 Q3C1V9 767 aa21.33■■□□□ 1.01
C1orf43-204ENST00000368518 CCAR1Q8IX12 1150 aaKnown RBP21.33■■□□□ 1.01
C1orf43-204ENST00000368518 LRRCC1Q9C099 1032 aa21.33■■□□□ 1.01
C1orf43-204ENST00000368518 DCP1AQ9NPI6 582 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms