RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MAGEB6P1A0A0J9YX57 407 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 GDF11O95390 407 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 EN2P19622 333 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 PLCD1P51178 756 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 FCGRTP55899 365 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 DNAJC2Q99543 621 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 DCTPP1Q9H773 170 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 PAG1Q9NWQ8 432 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 SERPINB13Q9UIV8 391 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
TNFRSF1A-202ENST00000366159 C19orf81C9J6K1 198 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ECM2O94769 699 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 HOXA7P31268 230 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ADD2P35612 726 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 PRKCZQ05513 592 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 GABPAQ06546 454 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 MTMR2Q13614 643 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 TTC6Q86TZ1 520 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ASCC2Q9H1I8 757 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 GABRQQ9UN88 632 aa16.58■□□□□ 0.24
TNFRSF1A-202ENST00000366159 MYPNQ86TC9 1320 aa16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SMARCA5O60264 1052 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SHMT1P34896 483 aa16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 PABPC4Q13310 644 aaKnown RBP eCLIP16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SMCR8Q8TEV9 937 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 TMEM106CQ9BVX2 250 aa16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
TNFRSF1A-202ENST00000366159 GH2P01242 217 aa16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 GRK4P32298 578 aa16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 GCLCP48506 637 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 EVX2Q03828 476 aa16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 LCORLQ8N3X6 602 aa16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 RAET1EQ8TD07 263 aa16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 CRNKL1Q9BZJ0 848 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 DCP1AQ9NPI6 582 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
TNFRSF1A-202ENST00000366159 NAV1Q8NEY1 1877 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 CHGBP05060 677 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 GUCY1A2P33402 732 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 IRF5Q13568 498 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 UBE3CQ15386 1083 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 MTFR1Q15390 333 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 PRPF38BQ5VTL8 546 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 POTEEQ6S8J3 1075 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 MORF4L1Q9UBU8 362 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
TNFRSF1A-202ENST00000366159 FLT3LGP49771 235 aa16.54■□□□□ 0.24
TNFRSF1A-202ENST00000366159 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-202ENST00000366159 PXYLP1Q8TE99 480 aa16.54■□□□□ 0.24
TNFRSF1A-202ENST00000366159 P2RX7Q99572 595 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-202ENST00000366159 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
TNFRSF1A-202ENST00000366159 TMOD4Q9NZQ9 345 aa16.54■□□□□ 0.24
TNFRSF1A-202ENST00000366159 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 TNPO2O14787 897 aaKnown RBP16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ARMT1Q9H993 441 aa16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 RNF216Q9NWF9 866 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 GJD2Q9UKL4 321 aa16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 TAOK2Q9UL54 1235 aa16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 MYH7P12883 1935 aa16.53■□□□□ 0.24
TNFRSF1A-202ENST00000366159 PRKAB2O43741 272 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 MYCP01106 439 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 SHISA4Q96DD7 197 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 KIAA1683Q9H0B3 1180 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 TXNRD2Q9NNW7 524 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ATP8A2Q9NTI2 1148 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.24
TNFRSF1A-202ENST00000366159 ADCY3O60266 1144 aa16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 MBD4O95243 580 aa16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 CYP2D6P10635 497 aa16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 HERVK_113P62684 666 aa16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 PUS7LQ9H0K6 701 aaKnown RBP16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 PLXNB2O15031 1838 aa16.51■□□□□ 0.23
TNFRSF1A-202ENST00000366159 PEX10O60683 326 aa16.5■□□□□ 0.23
TNFRSF1A-202ENST00000366159 GJB1P08034 283 aa16.5■□□□□ 0.23
TNFRSF1A-202ENST00000366159 CCL5P13501 91 aa16.5■□□□□ 0.23
TNFRSF1A-202ENST00000366159 GJA8P48165 433 aa16.5■□□□□ 0.23
TNFRSF1A-202ENST00000366159 IRX3P78415 501 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF1A-202ENST00000366159 COA7Q96BR5 231 aa16.5■□□□□ 0.23
TNFRSF1A-202ENST00000366159 SMIM22K7EJ46 135 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 ELNP15502 786 aa16.49■□□□□ 0.23
TNFRSF1A-202ENST00000366159 USP14P54578 494 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms