RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 CCDC112Q8NEF3 446 aa27.86■■■□□ 2.05
CROCCP2-201ENST00000362058 MORC2Q9Y6X9 1032 aaPredicted RBP27.86■■■□□ 2.05
CROCCP2-201ENST00000362058 CCDC88AQ3V6T2 1871 aa27.86■■■□□ 2.05
CROCCP2-201ENST00000362058 LAMB1P07942 1786 aa27.86■■■□□ 2.05
CROCCP2-201ENST00000362058 KIF2AO00139 706 aaPredicted RBP27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 FGRP09769 529 aa27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 DYNLL1P63167 89 aaKnown RBP27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 SYCP1Q15431 976 aa27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 IFIT1BQ5T764 474 aaKnown RBP27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 NYAP1Q6ZVC0 841 aa27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 FBXO33Q7Z6M2 555 aa27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 PCDHA5Q9Y5H7 936 aa27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 SRPRBQ9Y5M8 271 aaKnown RBP27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 KCNJ6P48051 423 aa27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 NR5A1Q13285 461 aa27.85■■■□□ 2.05
CROCCP2-201ENST00000362058 PRPF3O43395 683 aaKnown RBP27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 KANK3Q6NY19 840 aa27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 BICDL1Q6ZP65 573 aa27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 CELF1Q92879 486 aaKnown RBP27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 MAST2Q6P0Q8 1798 aa27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 USP27XA6NNY8 438 aa27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 MDM2Q00987 491 aaPredicted RBP27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 TMED8Q6PL24 325 aaPredicted RBP27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 ANKRD2Q9GZV1 360 aa27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 HSD3B7Q9H2F3 369 aa27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 PCDHB6Q9Y5E3 794 aa27.84■■■□□ 2.05
CROCCP2-201ENST00000362058 COL24A1Q17RW2 1714 aa27.83■■■□□ 2.05
CROCCP2-201ENST00000362058 TBC1D9BQ66K14 1250 aa27.83■■■□□ 2.05
CROCCP2-201ENST00000362058 DACH1Q9UI36 760 aa27.83■■■□□ 2.05
CROCCP2-201ENST00000362058 SERPINC1P01008 464 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 RPS8P62241 208 aaKnown RBP27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 POSTNQ15063 836 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 NLRP3Q96P20 1036 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 DDAH1O94760 285 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 UBASH3AP57075 661 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 ARMCX5Q6P1M9 558 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 CTR9Q6PD62 1173 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 FOXP4Q8IVH2 680 aaPredicted RBP27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 OXER1Q8TDS5 423 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 ANKRD7Q92527 254 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 CABP5Q9NP86 173 aa27.82■■■□□ 2.04
CROCCP2-201ENST00000362058 WTIPA6NIX2 430 aaPredicted RBP27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 POLR2DO15514 142 aaKnown RBP27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 KRT2P35908 639 aa27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 SPECC1Q5M775 1068 aa27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 RC3H1Q5TC82 1133 aaKnown RBP27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 NT5DC1Q5TFE4 455 aa27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 NSUN4Q96CB9 384 aaKnown RBP27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 CCDC34Q96HJ3 373 aa27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 NARFQ9UHQ1 456 aa27.81■■■□□ 2.04
CROCCP2-201ENST00000362058 ATP1A3P13637 1013 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 TRIML1Q8N9V2 468 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 ZNF592Q92610 1267 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 SETDB2Q96T68 719 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 PHF20Q9BVI0 1012 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 CCDC94Q9BW85 323 aaPredicted RBP27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 CRNKL1Q9BZJ0 848 aaKnown RBP27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 BRMS1Q9HCU9 246 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 LTBP4Q8N2S1 1624 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 TRIM75PA6NK02 468 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 BMP15O95972 392 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 FUT2Q10981 343 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 PKN1Q16512 942 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 ZNF384Q8TF68 577 aa27.8■■■□□ 2.04
CROCCP2-201ENST00000362058 CYP2D7A0A087X1C5 515 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 PSDA5PKW4 1024 aaPredicted RBP27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 ORC4O43929 436 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 HIBADHP31937 336 aaKnown RBP27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 MLKLQ8NB16 471 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 SMARCE1Q969G3 411 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 SERTAD1Q9UHV2 236 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 USP17L12C9JPN9 530 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 USP17L21D6R901 530 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 MECOMQ03112 1051 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 GRIN1Q05586 938 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 ATP8A2Q9NTI2 1148 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 TRMT1Q9NXH9 659 aaKnown RBP27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 VPS54Q9P1Q0 977 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 MAN1B1Q9UKM7 699 aa27.79■■■□□ 2.04
CROCCP2-201ENST00000362058 TROAPQ12815 778 aa27.78■■■□□ 2.04
CROCCP2-201ENST00000362058 FAM98CQ17RN3 349 aaKnown RBP27.78■■■□□ 2.04
CROCCP2-201ENST00000362058 NBPF5PQ86XG9 351 aaPredicted RBP27.78■■■□□ 2.04
CROCCP2-201ENST00000362058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.78■■■□□ 2.04
CROCCP2-201ENST00000362058 SMIM22K7EJ46 135 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 FOXN1O15353 648 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 ATP2B1P20020 1258 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 CFAP100Q494V2 611 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 AATFQ9NY61 560 aaKnown RBP eCLIP27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 V9GY48 417 aaPredicted RBP27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 KIAA1551Q9HCM1 1747 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 CCP110O43303 1012 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 PRDM1O75626 825 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 RPS6KA4O75676 772 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 TUBB4AP04350 444 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 SARSP49591 514 aaKnown RBP27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 PDCL2Q8N4E4 241 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 KIF18AQ8NI77 898 aa27.77■■■□□ 2.04
CROCCP2-201ENST00000362058 ZBTB22O15209 634 aa27.76■■■□□ 2.03
CROCCP2-201ENST00000362058 ZPR1O75312 459 aa27.76■■■□□ 2.03
CROCCP2-201ENST00000362058 TMTC3Q6ZXV5 915 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms