RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 RPS6KB1P23443 525 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 TUBE1Q9UJT0 475 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 HSF2BPO75031 334 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 ANP32DO95626 131 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 SSBP05455 408 aaKnown RBP eCLIP13.01□□□□□ -0.33
CNOT4-203ENST00000361528 GNAT1P11488 350 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 SCTRP47872 440 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 ELF3P78545 371 aaPredicted RBP13.01□□□□□ -0.33
CNOT4-203ENST00000361528 CREB3L3Q68CJ9 461 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 ARMCX6Q7L4S7 300 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 TRAPPC11Q7Z392 1133 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 MAF1Q9H063 256 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.01□□□□□ -0.33
CNOT4-203ENST00000361528 UBN2Q6ZU65 1347 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
CNOT4-203ENST00000361528 ZCCHC11Q5TAX3 1644 aaKnown RBP13.01□□□□□ -0.33
CNOT4-203ENST00000361528 SH3TC1Q8TE82 1336 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
CNOT4-203ENST00000361528 ATP4AP20648 1035 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 CNGA1P29973 690 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 NDUFA8P51970 172 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 ADKP55263 362 aaKnown RBP13□□□□□ -0.33
CNOT4-203ENST00000361528 CEBPZQ03701 1054 aaKnown RBP13□□□□□ -0.33
CNOT4-203ENST00000361528 ACBD5Q5T8D3 534 aaPredicted RBP13□□□□□ -0.33
CNOT4-203ENST00000361528 PPP4R3AQ6IN85 833 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 OLFM4Q6UX06 510 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 KCNG4Q8TDN1 519 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 CCDC51Q96ER9 411 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 STAMBPL1Q96FJ0 436 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 PCDHA7Q9UN72 937 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 IFT172Q9UG01 1749 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 ABCA8O94911 1581 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 OVOS2A0A0J9YW53 1432 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 OVOS2Q6IE36 1432 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 STXBP3O00186 592 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 KIAA0753Q2KHM9 967 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 TTMPQ5BVD1 217 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 DNAJC14Q6Y2X3 702 aaPredicted RBP13□□□□□ -0.33
CNOT4-203ENST00000361528 TRIM42Q8IWZ5 723 aa13□□□□□ -0.33
CNOT4-203ENST00000361528 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 DNM1LO00429 736 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 SMIM24O75264 130 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 NPTXRO95502 500 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 MYL1P05976 194 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 FECHP22830 423 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 PTH1RQ03431 593 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 NNTQ13423 1086 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 TOB2Q14106 344 aaPredicted RBP12.99□□□□□ -0.33
CNOT4-203ENST00000361528 EMBQ6PCB8 327 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 CYFIP2Q96F07 1278 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
CNOT4-203ENST00000361528 ZNF570Q96NI8 536 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 OSBPL7Q9BZF2 842 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 SLC5A4Q9NY91 659 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
CNOT4-203ENST00000361528 SOWAHDA6NJG2 315 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 DTNBO60941 627 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 MDH1P40925 334 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 HDLBPQ00341 1268 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 RASA3Q14644 834 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 GLE1Q53GS7 698 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 RBM17Q96I25 401 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 TRIM4Q9C037 500 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 RANBP17Q9H2T7 1088 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 ANKIB1Q9P2G1 1089 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 FRMPD1Q5SYB0 1578 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 CFAP73A6NFT4 308 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 GSTA1P08263 222 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 VIMP08670 466 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 CCNG1P51959 295 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 NCAPH2Q6IBW4 605 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 RAD9BQ6WBX8 426 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 ARFGAP2Q8N6H7 521 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 MAP4K1Q92918 833 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 CAVIN3Q969G5 261 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 CDC5LQ99459 802 aaKnown RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 MMADHCQ9H3L0 296 aaPredicted RBP12.98□□□□□ -0.33
CNOT4-203ENST00000361528 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
CNOT4-203ENST00000361528 A0A1B0GVL5 298 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 PSMD14O00487 310 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 YEATS4O95619 227 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 CTCFP49711 727 aaPredicted RBP12.97□□□□□ -0.33
CNOT4-203ENST00000361528 EPHB4P54760 987 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 MTF1Q14872 753 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
CNOT4-203ENST00000361528 RMI1Q9H9A7 625 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 BAIAP2L1Q9UHR4 511 aa12.97□□□□□ -0.33
CNOT4-203ENST00000361528 RBM8AQ9Y5S9 174 aaKnown RBP12.97□□□□□ -0.33
CNOT4-203ENST00000361528 ATP10BO94823 1461 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms