RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ZKSCAN5Q9Y2L8 839 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 SERPINB2P05120 415 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 HOMER2Q9NSB8 354 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 MRPL11Q9Y3B7 192 aaKnown RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 CCDC169A6NNP5 214 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 STAMBPO95630 424 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 MYCLP12524 364 aaPredicted RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 TMED8Q6PL24 325 aaPredicted RBP15.09■□□□□ 0.01
LDB3-202ENST00000361373 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 KDM3AQ9Y4C1 1321 aa15.09■□□□□ 0.01
LDB3-202ENST00000361373 TMX1Q9H3N1 280 aa15.08■□□□□ 0.01
LDB3-202ENST00000361373 AKR1B15C9JRZ8 316 aaPredicted RBP15.08■□□□□ 0.01
LDB3-202ENST00000361373 POLR2DO15514 142 aaKnown RBP15.08■□□□□ 0.01
LDB3-202ENST00000361373 CFBP00751 764 aa15.08■□□□□ 0.01
LDB3-202ENST00000361373 BIRC3Q13489 604 aa15.08■□□□□ 0.01
LDB3-202ENST00000361373 NCAPH2Q6IBW4 605 aa15.08■□□□□ 0.01
LDB3-202ENST00000361373 FANCBQ8NB91 859 aa15.08■□□□□ 0.01
LDB3-202ENST00000361373 SREK1Q8WXA9 508 aaKnown RBP15.08■□□□□ 0.01
LDB3-202ENST00000361373 IQCDQ96DY2 449 aa15.08■□□□□ 0.01
LDB3-202ENST00000361373 ZNF335Q9H4Z2 1342 aaPredicted RBP15.08■□□□□ 0
LDB3-202ENST00000361373 IQGAP3Q86VI3 1631 aa15.08■□□□□ 0
LDB3-202ENST00000361373 PPEF1O14829 653 aaPredicted RBP15.08■□□□□ 0
LDB3-202ENST00000361373 ARID5AQ03989 594 aa15.08■□□□□ 0
LDB3-202ENST00000361373 DCAF17Q5H9S7 520 aaPredicted RBP15.08■□□□□ 0
LDB3-202ENST00000361373 MAATS1Q7Z4T9 603 aa15.08■□□□□ 0
LDB3-202ENST00000361373 PHKBQ93100 1093 aa15.08■□□□□ 0
LDB3-202ENST00000361373 FAM107BQ9H098 131 aa15.08■□□□□ 0
LDB3-202ENST00000361373 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
LDB3-202ENST00000361373 SWAP70Q9UH65 585 aa15.08■□□□□ 0
LDB3-202ENST00000361373 A0A0D9SFI3 127 aa15.08■□□□□ 0
LDB3-202ENST00000361373 CHMP2AO43633 222 aa15.08■□□□□ 0
LDB3-202ENST00000361373 BTDP43251 543 aa15.08■□□□□ 0
LDB3-202ENST00000361373 CERKLQ49MI3 558 aaPredicted RBP15.08■□□□□ 0
LDB3-202ENST00000361373 ZSWIM6Q9HCJ5 1215 aa15.08■□□□□ 0
LDB3-202ENST00000361373 PKD2L1Q9P0L9 805 aa15.08■□□□□ 0
LDB3-202ENST00000361373 COMMD10Q9Y6G5 202 aa15.08■□□□□ 0
LDB3-202ENST00000361373 STX10O60499 249 aa15.08■□□□□ 0
LDB3-202ENST00000361373 PFKFB2O60825 505 aa15.08■□□□□ 0
LDB3-202ENST00000361373 HSF2BPO75031 334 aa15.08■□□□□ 0
LDB3-202ENST00000361373 PAK1Q13153 545 aa15.08■□□□□ 0
LDB3-202ENST00000361373 CSGALNACT2Q8N6G5 542 aa15.08■□□□□ 0
LDB3-202ENST00000361373 PNMA1Q8ND90 353 aa15.08■□□□□ 0
LDB3-202ENST00000361373 SMCO2A6NFE2 343 aa15.07■□□□□ 0
LDB3-202ENST00000361373 MSL1Q68DK7 614 aa15.07■□□□□ 0
LDB3-202ENST00000361373 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
LDB3-202ENST00000361373 MYL10Q9BUA6 226 aa15.07■□□□□ 0
LDB3-202ENST00000361373 MED23Q9ULK4 1368 aa15.07■□□□□ 0
LDB3-202ENST00000361373 EEF2P13639 858 aaKnown RBP15.07■□□□□ 0
LDB3-202ENST00000361373 HERC4Q5GLZ8 1057 aaPredicted RBP15.07■□□□□ 0
LDB3-202ENST00000361373 FAM47AQ5JRC9 791 aa15.07■□□□□ 0
LDB3-202ENST00000361373 DHX37Q8IY37 1157 aaKnown RBP15.07■□□□□ 0
LDB3-202ENST00000361373 DYNC1I1O14576 645 aa15.07■□□□□ 0
LDB3-202ENST00000361373 ZNF202O95125 648 aa15.07■□□□□ 0
LDB3-202ENST00000361373 NLRP10Q86W26 655 aa15.07■□□□□ 0
LDB3-202ENST00000361373 STMN4Q9H169 189 aaPredicted RBP15.07■□□□□ 0
LDB3-202ENST00000361373 XRCC6P12956 609 aaKnown RBP eCLIP15.07■□□□□ 0
LDB3-202ENST00000361373 PROSER3Q2NL68 480 aa15.07■□□□□ 0
LDB3-202ENST00000361373 SMCR8Q8TEV9 937 aaPredicted RBP15.07■□□□□ 0
LDB3-202ENST00000361373 MTUS1Q9ULD2 1270 aa15.07■□□□□ 0
LDB3-202ENST00000361373 ZMYM6O95789 1325 aa15.06■□□□□ 0
LDB3-202ENST00000361373 FGAP02671 866 aa15.06■□□□□ 0
LDB3-202ENST00000361373 OTUD6AQ7L8S5 288 aa15.06■□□□□ 0
LDB3-202ENST00000361373 CABP7Q86V35 215 aa15.06■□□□□ 0
LDB3-202ENST00000361373 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
LDB3-202ENST00000361373 SSX2IPQ9Y2D8 614 aa15.06■□□□□ 0
LDB3-202ENST00000361373 TNKSO95271 1327 aa15.06■□□□□ 0
LDB3-202ENST00000361373 ZMYM1Q5SVZ6 1142 aa15.06■□□□□ 0
LDB3-202ENST00000361373 EDC3Q96F86 508 aaKnown RBP15.06■□□□□ 0
LDB3-202ENST00000361373 ARFGAP3Q9NP61 516 aa15.06■□□□□ 0
LDB3-202ENST00000361373 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
LDB3-202ENST00000361373 TRIM37O94972 964 aa15.06■□□□□ 0
LDB3-202ENST00000361373 FOSP01100 380 aaPredicted RBP15.06■□□□□ 0
LDB3-202ENST00000361373 MYSM1Q5VVJ2 828 aa15.06■□□□□ 0
LDB3-202ENST00000361373 KIAA0825Q8IV33 1275 aa15.06■□□□□ 0
LDB3-202ENST00000361373 KDM6BO15054 1643 aa15.06■□□□□ 0
LDB3-202ENST00000361373 PHKA1P46020 1223 aa15.06■□□□□ 0
LDB3-202ENST00000361373 GPR162Q16538 588 aa15.06■□□□□ 0
LDB3-202ENST00000361373 CCDC84Q86UT8 332 aaPredicted RBP15.06■□□□□ 0
LDB3-202ENST00000361373 SULF1Q8IWU6 871 aa15.06■□□□□ 0
LDB3-202ENST00000361373 BLIDQ8IZY5 108 aa15.06■□□□□ 0
LDB3-202ENST00000361373 NOX5Q96PH1 765 aa15.06■□□□□ 0
LDB3-202ENST00000361373 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.06■□□□□ 0
LDB3-202ENST00000361373 ZNF521Q96K83 1311 aa15.06■□□□□ 0
LDB3-202ENST00000361373 GSPT1P15170 499 aaKnown RBP15.05■□□□□ 0
LDB3-202ENST00000361373 ICA1Q05084 483 aa15.05■□□□□ 0
LDB3-202ENST00000361373 RAPGEF1Q13905 1077 aa15.05■□□□□ 0
LDB3-202ENST00000361373 CTNND2Q9UQB3 1225 aa15.05■□□□□ 0
LDB3-202ENST00000361373 CPSF1Q10570 1443 aaKnown RBP15.05■□□□□ 0
LDB3-202ENST00000361373 TRPC3Q13507 836 aa15.05■□□□□ -0
LDB3-202ENST00000361373 USH1GQ495M9 461 aa15.05■□□□□ -0
LDB3-202ENST00000361373 GPATCH4Q5T3I0 446 aaKnown RBP15.05■□□□□ -0
LDB3-202ENST00000361373 SPECC1LQ69YQ0 1117 aa15.05■□□□□ -0
LDB3-202ENST00000361373 NAP1L3Q99457 506 aaPredicted RBP15.05■□□□□ -0
LDB3-202ENST00000361373 CDC42BPGQ6DT37 1551 aa15.05■□□□□ -0
LDB3-202ENST00000361373 TAF12Q16514 161 aa15.05■□□□□ -0
LDB3-202ENST00000361373 DBNLQ9UJU6 430 aaKnown RBP15.05■□□□□ -0
LDB3-202ENST00000361373 NLRP12P59046 1061 aa15.05■□□□□ -0
LDB3-202ENST00000361373 TUBB2AQ13885 445 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms