RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ST3GAL1Q11201 340 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 EXOC1Q9NV70 894 aa13.88□□□□□ -0.19
COL20A1-201ENST00000358894 GNAQP50148 359 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 EVCP57679 992 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 EXOSC10Q01780 885 aaKnown RBP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 UBXN1Q04323 297 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 ERCC6LQ2NKX8 1250 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 CYB5R4Q7L1T6 521 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 DESI2Q9BSY9 194 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 RASSF4Q9H2L5 321 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 ARFGAP3Q9NP61 516 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 CYP2D7A0A087X1C5 515 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 COL9A3Q14050 684 aaPredicted RBP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 STRBPQ96SI9 672 aaKnown RBP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 ALDH8A1Q9H2A2 487 aaPredicted RBP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 SYNRGQ9UMZ2 1314 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
COL20A1-201ENST00000358894 RAB34Q9BZG1 259 aa13.87□□□□□ -0.19
COL20A1-201ENST00000358894 LETM2Q2VYF4 491 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 SUSD4Q5VX71 490 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 PLCD4Q9BRC7 762 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 UBA5Q9GZZ9 404 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 KCNF1Q9H3M0 494 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 GUCA1BQ9UMX6 200 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 ZNF335Q9H4Z2 1342 aaPredicted RBP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 ARHGAP6O43182 974 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 DRC1Q96MC2 740 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 COBLO75128 1261 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 DYNLL1P63167 89 aaKnown RBP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 SRRTQ9BXP5 876 aaKnown RBP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 PHACTR2O75167 634 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 USP8P40818 1118 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 LONRF3Q496Y0 759 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 FMR1NBQ8N0W7 255 aaPredicted RBP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 RSPH14Q9UHP6 348 aa13.86□□□□□ -0.19
COL20A1-201ENST00000358894 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
COL20A1-201ENST00000358894 ZNF76P36508 570 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 RPS8P62241 208 aaKnown RBP13.85□□□□□ -0.19
COL20A1-201ENST00000358894 AMPD3Q01432 767 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 TFAP4Q01664 338 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 SPECC1LQ69YQ0 1117 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 ZSCAN10Q96SZ4 725 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-201ENST00000358894 JADE2Q9NQC1 790 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 NEDD4P46934 1319 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 ZBTB22O15209 634 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 CTDNEP1O95476 244 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 TUBB4AP04350 444 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 MATR3P43243 847 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL20A1-201ENST00000358894 GSTO1P78417 241 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 TAB2Q9NYJ8 693 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.85□□□□□ -0.19
COL20A1-201ENST00000358894 RFX7Q2KHR2 1363 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 CDC27P30260 824 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 NAA30Q147X3 362 aaPredicted RBP13.85□□□□□ -0.19
COL20A1-201ENST00000358894 KCNB2Q92953 911 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 ANKRD2Q9GZV1 360 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 LUC7LQ9NQ29 371 aaKnown RBP13.85□□□□□ -0.19
COL20A1-201ENST00000358894 PRDM4Q9UKN5 801 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 TNS3Q68CZ2 1445 aa13.85□□□□□ -0.19
COL20A1-201ENST00000358894 KIF28PB7ZC32 967 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 AKR1B10O60218 316 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 RHOXF2BP0C7M4 288 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 MNAT1P51948 309 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 RHOXF2Q9BQY4 288 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 CDC25BP30305 580 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 CCDC40Q4G0X9 1142 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 PLA2G4DQ86XP0 818 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 GPIHBP1Q8IV16 184 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 TXLNBQ8N3L3 684 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 CRACR2AQ9BSW2 395 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 GBP3Q9H0R5 595 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 CSRNP2Q9H175 543 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 PALLDQ8WX93 1383 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 CTAGE9A4FU28 777 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 PPP6R2O75170 966 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 IFNAR1P17181 557 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 EIF6P56537 245 aaKnown RBP13.84□□□□□ -0.19
COL20A1-201ENST00000358894 ETF1P62495 437 aaKnown RBP13.84□□□□□ -0.19
COL20A1-201ENST00000358894 SMYD4Q8IYR2 804 aaPredicted RBP13.84□□□□□ -0.19
COL20A1-201ENST00000358894 EEF2KMTQ96G04 330 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 PCDHB6Q9Y5E3 794 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 DLG5Q8TDM6 1919 aa13.84□□□□□ -0.19
COL20A1-201ENST00000358894 CTAGE15A4D2H0 777 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 CTAGE8P0CG41 777 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 ERCC3P19447 782 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 TNNI2P48788 182 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 CTAGE6Q86UF2 777 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 CNGA4Q8IV77 575 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.19
COL20A1-201ENST00000358894 SLF2Q8IX21 1173 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms