RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ZNF444Q8N0Y2 327 aaPredicted RBP17.61■□□□□ 0.41
CCNE1-202ENST00000357943 C2orf69Q8N8R5 385 aa17.61■□□□□ 0.41
CCNE1-202ENST00000357943 B4E1Z4 1266 aa17.6■□□□□ 0.41
CCNE1-202ENST00000357943 ORC4O43929 436 aa17.6■□□□□ 0.41
CCNE1-202ENST00000357943 RANBP6O60518 1105 aaKnown RBP17.6■□□□□ 0.41
CCNE1-202ENST00000357943 PCP11498 1178 aaKnown RBP17.6■□□□□ 0.41
CCNE1-202ENST00000357943 AKR1B1P15121 316 aa17.6■□□□□ 0.41
CCNE1-202ENST00000357943 CAP2P40123 477 aa17.6■□□□□ 0.41
CCNE1-202ENST00000357943 FKBP1BP68106 108 aa17.6■□□□□ 0.41
CCNE1-202ENST00000357943 FAM47AQ5JRC9 791 aa17.6■□□□□ 0.41
CCNE1-202ENST00000357943 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
CCNE1-202ENST00000357943 CTNND1O60716 968 aaKnown RBP17.59■□□□□ 0.41
CCNE1-202ENST00000357943 MAP3K9P80192 1104 aa17.59■□□□□ 0.41
CCNE1-202ENST00000357943 VGLL4Q14135 290 aa17.59■□□□□ 0.41
CCNE1-202ENST00000357943 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
CCNE1-202ENST00000357943 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
CCNE1-202ENST00000357943 PAPPA2Q9BXP8 1791 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 TSPY2A6NKD2 308 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 MPHOSPH10O00566 681 aaKnown RBP17.58■□□□□ 0.41
CCNE1-202ENST00000357943 KDM4AO75164 1064 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 GH2P01242 217 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 TFAP4Q01664 338 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 TRDNQ13061 729 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 ABCB5Q2M3G0 1257 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 LDLRAD1Q5T700 205 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 ANKRD13AQ8IZ07 590 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 NCOA7Q8NI08 942 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 CLMNQ96JQ2 1002 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 CCDC17Q96LX7 622 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.58■□□□□ 0.41
CCNE1-202ENST00000357943 CNNM2Q9H8M5 875 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 TSHZ2Q9NRE2 1034 aa17.58■□□□□ 0.41
CCNE1-202ENST00000357943 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.58■□□□□ 0.41
CCNE1-202ENST00000357943 PCNTO95613 3336 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 TMEM88BA6NKF7 163 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 SAPCD2Q86UD0 394 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 SCYL3Q8IZE3 742 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 ESR2Q92731 530 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 KRT23Q9C075 422 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 ZSWIM5Q9P217 1185 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 ZBTB21Q9ULJ3 1066 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 CSADQ9Y600 493 aa17.58■□□□□ 0.4
CCNE1-202ENST00000357943 TRPM7Q96QT4 1865 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 TSPY3P0CV98 308 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 TSPY8P0CW00 308 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 GUCY1A2P33402 732 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 HUNKP57058 714 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 KRT32Q14532 448 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 NOL9Q5SY16 702 aaKnown RBP17.57■□□□□ 0.4
CCNE1-202ENST00000357943 RALYLQ86SE5 291 aaKnown RBP17.57■□□□□ 0.4
CCNE1-202ENST00000357943 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
CCNE1-202ENST00000357943 NEK1Q96PY6 1258 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 SNCAIPQ9Y6H5 919 aa17.57■□□□□ 0.4
CCNE1-202ENST00000357943 NMT2O60551 498 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 ASNSP08243 561 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 RBM25P49756 843 aaKnown RBP17.56■□□□□ 0.4
CCNE1-202ENST00000357943 APLP1P51693 650 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 ANAPC15P60006 121 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 SEPT2Q15019 361 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 TMEM179Q6ZVK1 233 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 CYB5R4Q7L1T6 521 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 CHST3Q7LGC8 479 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 CLEC10AQ8IUN9 316 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
CCNE1-202ENST00000357943 NEDD1Q8NHV4 660 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 JAKMIP1Q96N16 626 aaKnown RBP17.56■□□□□ 0.4
CCNE1-202ENST00000357943 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 CABP5Q9NP86 173 aa17.56■□□□□ 0.4
CCNE1-202ENST00000357943 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
CCNE1-202ENST00000357943 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
CCNE1-202ENST00000357943 PICK1Q9NRD5 415 aa17.55■□□□□ 0.4
CCNE1-202ENST00000357943 IL17RBQ9NRM6 502 aa17.55■□□□□ 0.4
CCNE1-202ENST00000357943 TLL2Q9Y6L7 1015 aa17.55■□□□□ 0.4
CCNE1-202ENST00000357943 OTOFQ9HC10 1997 aa17.55■□□□□ 0.4
CCNE1-202ENST00000357943 PLIN4Q96Q06 1357 aa17.55■□□□□ 0.4
CCNE1-202ENST00000357943 CPA1P15085 419 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 PTPRAP18433 802 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 ABT1Q9ULW3 272 aaKnown RBP17.54■□□□□ 0.4
CCNE1-202ENST00000357943 MYH8P13535 1937 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 IGKV6D-41A0A0C4DH26 115 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 UNCXA6NJT0 531 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 CASTP20810 708 aaKnown RBP17.54■□□□□ 0.4
CCNE1-202ENST00000357943 NT5C2P49902 561 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 ANTXR2P58335 489 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 IL17RAQ96F46 866 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 CEP95Q96GE4 821 aa17.54■□□□□ 0.4
CCNE1-202ENST00000357943 CEP350Q5VT06 3117 aa17.53■□□□□ 0.4
CCNE1-202ENST00000357943 SLC10A4Q96EP9 437 aa17.53■□□□□ 0.4
CCNE1-202ENST00000357943 TCEANC2Q96MN5 208 aa17.53■□□□□ 0.4
CCNE1-202ENST00000357943 KIF2CQ99661 725 aa17.53■□□□□ 0.4
CCNE1-202ENST00000357943 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
CCNE1-202ENST00000357943 GINM1Q9NU53 330 aa17.53■□□□□ 0.4
CCNE1-202ENST00000357943 ZHX2Q9Y6X8 837 aa17.53■□□□□ 0.4
CCNE1-202ENST00000357943 SPDYE5A6NIY4 337 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 USP17L5A8MUK1 530 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 PSMA5P28066 241 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 MCM5P33992 734 aa17.52■□□□□ 0.4
CCNE1-202ENST00000357943 ICA1Q05084 483 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms