RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 GRIN1Q05586 938 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 RILPL1Q5EBL4 403 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
PHTF1-201ENST00000357783 VPS54Q9P1Q0 977 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 PCDHB6Q9Y5E3 794 aa18.23■□□□□ 0.51
PHTF1-201ENST00000357783 SMC2O95347 1197 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 PLEKHA8P1O95397 391 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 SLC51AQ86UW1 340 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 TUBE1Q9UJT0 475 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 UBAP1LF5GYI3 381 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 METTL16Q86W50 562 aaKnown RBP18.22■□□□□ 0.51
PHTF1-201ENST00000357783 CNNM3Q8NE01 707 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 SHISA4Q96DD7 197 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 C16orf45Q96MC5 204 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-201ENST00000357783 CRNKL1Q9BZJ0 848 aaKnown RBP18.22■□□□□ 0.51
PHTF1-201ENST00000357783 NCAPHQ15003 741 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 KRBA2Q6ZNG9 492 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 TSC1Q92574 1164 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 CABP5Q9NP86 173 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 DCP1AQ9NPI6 582 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-201ENST00000357783 IFNKQ9P0W0 207 aa18.22■□□□□ 0.51
PHTF1-201ENST00000357783 FBXO2Q9UK22 296 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-201ENST00000357783 TNRC6CQ9HCJ0 1690 aaKnown RBP18.21■□□□□ 0.51
PHTF1-201ENST00000357783 CYP2D6P10635 497 aa18.21■□□□□ 0.51
PHTF1-201ENST00000357783 TM4SF1P30408 202 aa18.21■□□□□ 0.51
PHTF1-201ENST00000357783 TPM4P67936 248 aa18.21■□□□□ 0.51
PHTF1-201ENST00000357783 XPO4Q9C0E2 1151 aaKnown RBP18.21■□□□□ 0.51
PHTF1-201ENST00000357783 USP21Q9UK80 565 aa18.21■□□□□ 0.51
PHTF1-201ENST00000357783 NHSQ6T4R5 1651 aa18.21■□□□□ 0.51
PHTF1-201ENST00000357783 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
PHTF1-201ENST00000357783 NMT2O60551 498 aa18.21■□□□□ 0.5
PHTF1-201ENST00000357783 PPP2R5BQ15173 497 aa18.21■□□□□ 0.5
PHTF1-201ENST00000357783 PKN1Q16512 942 aa18.21■□□□□ 0.5
PHTF1-201ENST00000357783 SLC4A8Q2Y0W8 1093 aa18.21■□□□□ 0.5
PHTF1-201ENST00000357783 BAZ2BQ9UIF8 2168 aaKnown RBP18.2■□□□□ 0.5
PHTF1-201ENST00000357783 PDS5AQ29RF7 1337 aaKnown RBP18.2■□□□□ 0.5
PHTF1-201ENST00000357783 LAMB1P07942 1786 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 DLEC1Q9Y238 1755 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 FAM205CA6NFA0 338 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 SMTNL1A8MU46 457 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 FGRP09769 529 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 LMOD1P29536 600 aaPredicted RBP18.2■□□□□ 0.5
PHTF1-201ENST00000357783 FUT2Q10981 343 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 FAM47AQ5JRC9 791 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 V9GY48 417 aaPredicted RBP18.2■□□□□ 0.5
PHTF1-201ENST00000357783 FOXN1O15353 648 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 PCP11498 1178 aaKnown RBP18.2■□□□□ 0.5
PHTF1-201ENST00000357783 PTPREP23469 700 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 TROAPQ12815 778 aa18.2■□□□□ 0.5
PHTF1-201ENST00000357783 FNBP4Q8N3X1 1017 aaPredicted RBP18.2■□□□□ 0.5
PHTF1-201ENST00000357783 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.2■□□□□ 0.5
PHTF1-201ENST00000357783 NEMFO60524 1076 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 SKILP12757 684 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 XBP1P17861 261 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 DZIP1Q86YF9 867 aaKnown RBP18.19■□□□□ 0.5
PHTF1-201ENST00000357783 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 MAST2Q6P0Q8 1798 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 RFC4P35249 363 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 FOXP4Q8IVH2 680 aaPredicted RBP18.19■□□□□ 0.5
PHTF1-201ENST00000357783 ANKIB1Q9P2G1 1089 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 PCDHA5Q9Y5H7 936 aa18.19■□□□□ 0.5
PHTF1-201ENST00000357783 TPD52L1Q16890 204 aaPredicted RBP18.18■□□□□ 0.5
PHTF1-201ENST00000357783 RBM28Q9NW13 759 aaKnown RBP18.18■□□□□ 0.5
PHTF1-201ENST00000357783 RIOK3O14730 519 aaKnown RBP18.18■□□□□ 0.5
PHTF1-201ENST00000357783 POLR2DO15514 142 aaKnown RBP18.18■□□□□ 0.5
PHTF1-201ENST00000357783 PRPF3O43395 683 aaKnown RBP18.18■□□□□ 0.5
PHTF1-201ENST00000357783 EARS2Q5JPH6 523 aaKnown RBP18.18■□□□□ 0.5
PHTF1-201ENST00000357783 TMC6Q7Z403 805 aa18.18■□□□□ 0.5
PHTF1-201ENST00000357783 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
PHTF1-201ENST00000357783 IKBKBO14920 756 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 ORC4O43929 436 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 CALM1P0DP23 149 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 CALM2P0DP24 149 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 CALM3P0DP25 149 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 ATP1A3P13637 1013 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 KRT2P35908 639 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 CCZ1BP86790 482 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 CCZ1P86791 482 aaPredicted RBP18.17■□□□□ 0.5
PHTF1-201ENST00000357783 PHF20Q9BVI0 1012 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 CEP131Q9UPN4 1083 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 DDAH1O94760 285 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 OLFM4Q6UX06 510 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 TMTC3Q6ZXV5 915 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 PDILTQ8N807 584 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 HSD3B7Q9H2F3 369 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 THSD7AQ9UPZ6 1657 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 KIAA1551Q9HCM1 1747 aa18.17■□□□□ 0.5
PHTF1-201ENST00000357783 TNNT1P13805 278 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 GTF2F1P35269 517 aaKnown RBP eCLIP18.16■□□□□ 0.5
PHTF1-201ENST00000357783 GSDMDP57764 484 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 FANCCQ00597 558 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 MYL5Q02045 173 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 ARPP21Q9UBL0 812 aaPredicted RBP18.16■□□□□ 0.5
PHTF1-201ENST00000357783 SERTAD1Q9UHV2 236 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 SRPRBQ9Y5M8 271 aaKnown RBP18.16■□□□□ 0.5
PHTF1-201ENST00000357783 IRS2Q9Y4H2 1338 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 SBF2Q86WG5 1849 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 TRIM75PA6NK02 468 aa18.16■□□□□ 0.5
PHTF1-201ENST00000357783 USP27XA6NNY8 438 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms