RNA–Protein interactions for RNA: ENST00000355445.7

TMEM116-201, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-201ENST00000355445 TIMM10P62072 90 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 MECOMQ03112 1051 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 ANKRD13CQ8N6S4 541 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 MEIS3Q99687 375 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-201ENST00000355445 SIPA1L1O43166 1804 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 MAST2Q6P0Q8 1798 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 GPR75-ASB3A0A0A6YYF3 556 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 A0A1B0GUL7 405 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 SOX1O00570 391 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-201ENST00000355445 HOXB1P14653 301 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-201ENST00000355445 FAM110CQ1W6H9 321 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 DIS3LQ8TF46 1054 aaKnown RBP9.73□□□□□ -0.85
TMEM116-201ENST00000355445 CRISPLD2Q9H0B8 497 aa9.73□□□□□ -0.85
TMEM116-201ENST00000355445 NOB1Q9ULX3 412 aaKnown RBP9.73□□□□□ -0.85
TMEM116-201ENST00000355445 DDX60LQ5H9U9 1706 aaKnown RBP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 PLXNB2O15031 1838 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 EVI5O60447 810 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 TFRCP02786 760 aaKnown RBP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 TFCP2Q12800 502 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 RRP1BQ14684 758 aaKnown RBP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 MVPQ14764 893 aaKnown RBP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 SPTY2D1Q68D10 685 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 PROCA1Q8NCQ7 364 aaPredicted RBP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 COA7Q96BR5 231 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 XAGE2Q96GT9 111 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 API5Q9BZZ5 524 aaKnown RBP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.72□□□□□ -0.85
TMEM116-201ENST00000355445 HMG20BQ9P0W2 317 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 LAMA3Q16787 3333 aa9.72□□□□□ -0.85
TMEM116-201ENST00000355445 A0A1W2PPC1 479 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 SRGAP3O43295 1099 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 TBC1D12O60347 775 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 HMGCS2P54868 508 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 SPP2Q13103 211 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 TBC1D9Q6ZT07 1266 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 PLPP6Q8IY26 295 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 TRMT2AQ8IZ69 625 aaKnown RBP9.71□□□□□ -0.86
TMEM116-201ENST00000355445 ZNF280CQ8ND82 737 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 LRCH3Q96II8 777 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 PAWRQ96IZ0 340 aaKnown RBP9.71□□□□□ -0.86
TMEM116-201ENST00000355445 OSBPL5Q9H0X9 879 aaPredicted RBP9.71□□□□□ -0.86
TMEM116-201ENST00000355445 STAP2Q9UGK3 403 aa9.71□□□□□ -0.86
TMEM116-201ENST00000355445 HMGCRP04035 888 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 TRIM32Q13049 653 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 MTX1Q13505 466 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 SPATA5Q8NB90 893 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 MARVELD3Q96A59 401 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 NSUN4Q96CB9 384 aaKnown RBP9.7□□□□□ -0.86
TMEM116-201ENST00000355445 ASCC2Q9H1I8 757 aaPredicted RBP9.7□□□□□ -0.86
TMEM116-201ENST00000355445 HDAC5Q9UQL6 1122 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 AKAP2Q9Y2D5 859 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 COL6A3P12111 3177 aa9.7□□□□□ -0.86
TMEM116-201ENST00000355445 CDK5RAP2Q96SN8 1893 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 CAP2P40123 477 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 GCLCP48506 637 aaPredicted RBP9.69□□□□□ -0.86
TMEM116-201ENST00000355445 NECAB2Q7Z6G3 386 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 C7orf61Q8IZ16 206 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 NEUROD6Q96NK8 337 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 RAI14Q9P0K7 980 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 GJD2Q9UKL4 321 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 DOCK3Q8IZD9 2030 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 FOCADQ5VW36 1801 aa9.69□□□□□ -0.86
TMEM116-201ENST00000355445 USP17L5A8MUK1 530 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 PEX10O60683 326 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 MAP4K4O95819 1239 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 LDHCP07864 332 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 CT47B1P0C2W7 299 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 CAPN2P17655 700 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 ARID4AP29374 1257 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 MCAMP43121 646 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 GSTO1P78417 241 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 JAG1P78504 1218 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 PABPC4Q13310 644 aaKnown RBP eCLIP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 MTMR2Q13614 643 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 DSG2Q14126 1118 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 SHROOM1Q2M3G4 852 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 TEX11Q8IYF3 940 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 ANKLE1Q8NAG6 615 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 SH3RF3Q8TEJ3 882 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 TRIB2Q92519 343 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 DDX27Q96GQ7 796 aaKnown RBP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 GDF15Q99988 308 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 MORF4L1Q9UBU8 362 aa9.68□□□□□ -0.86
TMEM116-201ENST00000355445 ZMYND8Q9ULU4 1186 aaPredicted RBP9.68□□□□□ -0.86
TMEM116-201ENST00000355445 GNAI3P08754 354 aa9.67□□□□□ -0.86
TMEM116-201ENST00000355445 RARSP54136 660 aaKnown RBP9.67□□□□□ -0.86
TMEM116-201ENST00000355445 GORABQ5T7V8 394 aa9.67□□□□□ -0.86
TMEM116-201ENST00000355445 ERICH6BQ5W0A0 696 aa9.67□□□□□ -0.86
TMEM116-201ENST00000355445 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
TMEM116-201ENST00000355445 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
TMEM116-201ENST00000355445 DNAJC18Q9H819 358 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms